| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1560 |
|---|
| Symbol | |
|---|
| ID | 5407703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 741735 |
|---|
| End bp | 743879 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640872189 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001408021 |
|---|
| Protein GI | 154173777 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.3619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG GGTATTTTCT AAGCGTAGCG GCTTGTTTGA TGTTGGCTCA GGGGTTGAGT
GCTACCGAAA AGGTAACGCT AGAAGGCGTG GAGGTAAATA GCGTCGGCGA TAATATCTCT
GAAAGCGGCG TGGGCGAAGG TATGCTAAAT AAAAATGTCC AAAACGGGCT ATTTGCCGGC
ACAAAGGTGC AGGACGTCCC ATATCAGATC AACACGATCA CAAAAGAGAT GATGTCAAAT
CAAGGTGCGC TTGGCGTCGA GGATACGGCA AAATTTTTCC CATCGATGAA TATCCAAGGC
GACGGCGCGC TCGGACGTAA TCAAACTCGC GGCTTTGCAG GCGGTATCGT GGGAAATCAC
TTCTGGGACG GCTTTTACGT GGCTTCTACG ACGGCGATGC CGATGATAAT GTTTGAGAGC
TTGCAGGTGC AAAGCGGTCT CATCGGCTCG CTTTACGGCG GACAAGCTCC AAGCGGAAAT
TTCAGCTATA CCTTAAAACA TCCCGTAAAT TCACAGCACG CGATCTGGGC GGACTATGCT
TCTCGCGCAA ATTTTGGCAT CGGGCTTGAC AGCTCGGATA AATTTGAATA TATCGGCTAC
CGCGGCGTAT TTTACACGAG TGACGGGGCA AAGCAGGCAA AGGATAGCAA TCTCCAACGT
AGGCTTGCTA GTATGGTGCT TGAATTTTAC CCAAGCGAGT CTGTGACGAT AGAGACTGCC
GGTAGCTACT ACGAGCACCA TATGCGCGGC TTTGCAGGCG GCATCGCCTT GCCGATAGAC
GGGGCTACCG GCAAGGCGAA GTGGAGGCTT CCAGATCCGC TTGATAGCAA AACGCCGGGG
CTTGGACAAA AATTTGCCGG TGTGAATTTA TTTAGTAAAA ATTTAAGCCT CAAACTAAAA
TACGCCCCGA GCGATCGCTG GTATTTCGAG GGCGGATTTG GACTGCATAG AAACGACCGC
GATATATTTC GCGTGACAAA TATCATCACG GGCAATAACG GCGAGTACTC GCAAAAACAC
GACGGCGGTA TGCCAAATAC GGCGATTTAC CGCGTGGATA TAAAAAGCGC GTTTGCCAAG
GCGACGACAA ATTTTGATAC CTTTGGGCTC AACCACGACC TAGGCGTGCA GGCAAATGGC
TACAAGACGA CTTATAGCGC TTACAATAAA AGCTCGACCT CCGCGACCAT CGCAACAGGC
AATATAAATA GCCCTATCGT TGTAAATTCT AGTTCGGCTA AAAAGGGCGG CGGCGGACTG
CACAAGACGC AGATCATCGA TATGAGAAAT ATCGCGGTGC TCGATAATAT CAGGATAAAC
GATAAATTTA GCCTTATTTT AAGCCTCTCA AACGTCTGGT TTGACAACAC CTCAGTCGCT
ACGAGCGGTG CAAAAAAGAA AAACGTCGAT AAATCAGGGC TTAGCCATGG TGCGAGCCTA
GTTTATAGAC CAACCCAAAA TTTAAGCCTC TATCTCACAT ACGCTGACAG CCTCCAACAG
CCCGCATACA ACAGTGTCAC GAACACGACG CTAGATCCAT ATAGGAGCAA ACAATACGAA
TTTGGCGTCA AAGGCAGGTT TGACGAGCTT GACGTCTCGG CGGCGATATT TGATATGAAA
CGGCCTATCG CGTATCTGCG AAACGGCTCG TTTAGCGTGC AAGGCGAGCA GCGAAACAGA
GGGCTTGAGC TGACTGCAGG TGGCAAACTC GTGCAAAATT TGAGTCTATT TGGCGGTATC
ACGATGATGA ACAACAAGCT AAAACACGCT CAGCTAGCCG CAGCCGAGGG CAAAAACGTG
ATCGGCGTGC CAAAGACGCA GGTAAATTTA CTCTTTGACT ATGTCGTGCC AAATACCGAC
AAGCTCGCAT TCAGCACAAA TTTCCACTAC GAGAGCGGGA TGTATATCGA TGATGCCAAC
ACACAAAAAA CGCCTAGCTT TTTCACGACC GACATCGGTG TGAGATATGT CAGCAAGGCA
CTTTTAGGCA AGCAAACGAC GCTAAGATTT AACATCAACA ATCTATTTAA CGAAAAATAC
TACTACGCGA TGATGTTTAG CAACGACAGT ATAGCAAATC GCAACAACAC TTTCCACCTT
GGTGAAAGTA GGACGTTTAT GCTTTCAGCG GAGGTTAAAT TTTAA
|
|---|
| Protein sequence | MKTGYFLSVA ACLMLAQGLS ATEKVTLEGV EVNSVGDNIS ESGVGEGMLN KNVQNGLFAG
TKVQDVPYQI NTITKEMMSN QGALGVEDTA KFFPSMNIQG DGALGRNQTR GFAGGIVGNH
FWDGFYVAST TAMPMIMFES LQVQSGLIGS LYGGQAPSGN FSYTLKHPVN SQHAIWADYA
SRANFGIGLD SSDKFEYIGY RGVFYTSDGA KQAKDSNLQR RLASMVLEFY PSESVTIETA
GSYYEHHMRG FAGGIALPID GATGKAKWRL PDPLDSKTPG LGQKFAGVNL FSKNLSLKLK
YAPSDRWYFE GGFGLHRNDR DIFRVTNIIT GNNGEYSQKH DGGMPNTAIY RVDIKSAFAK
ATTNFDTFGL NHDLGVQANG YKTTYSAYNK SSTSATIATG NINSPIVVNS SSAKKGGGGL
HKTQIIDMRN IAVLDNIRIN DKFSLILSLS NVWFDNTSVA TSGAKKKNVD KSGLSHGASL
VYRPTQNLSL YLTYADSLQQ PAYNSVTNTT LDPYRSKQYE FGVKGRFDEL DVSAAIFDMK
RPIAYLRNGS FSVQGEQRNR GLELTAGGKL VQNLSLFGGI TMMNNKLKHA QLAAAEGKNV
IGVPKTQVNL LFDYVVPNTD KLAFSTNFHY ESGMYIDDAN TQKTPSFFTT DIGVRYVSKA
LLGKQTTLRF NINNLFNEKY YYAMMFSNDS IANRNNTFHL GESRTFMLSA EVKF
|
|---|
| |