Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1487 |
Symbol | |
ID | 5407016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 126911 |
End bp | 127762 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640871587 |
Product | endonuclease IV |
Protein accession | YP_001407428 |
Protein GI | 154174687 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000253859 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATACA TCGGAGCGCA CGTGAGCGCT AGCGGCGGCG TGCAAAACGC ACCTTTAAAC GCCGCAAAGA TCGGAGCTAA CGCCTTTGCG CTTTTTGTCA AAAACCAGCG TCAATGGTCG GCAAAGCCGC TTGAAAGTGC CGCTATTTCG GAGTTCGAGC AAAACTGCAA AGCCGCGAAC ATAAGCCCCC GCCATATCTT GCCTCACGAT AGCTATCTCA TAAATTTAGG CCACTATGAC GATGCTAAGC GCGAGCAAAG CTTTAATGCG TTTGTAGATG AGATAGAGCG CGTGAGCGAG CTTGGGCTGG AGCTTTTAAA TTTTCATCCC GGTTCACACC TAAACGAGAT AAGCCAAAAC GAGTGTCTAA ATTTGATCGC AGAGTGCATG AACGAGGCGT TAAAGCGCAC TGACGGCGTG AAGCTCGTCA TCGAAAATAC CGCGGGACAA GGCTCGAATT TAGGTTTTAG GTTCGAGCAG CTGGCGTATC TGATCGAGCG CACGGATGAT AAGAGCCGCG TTGGCGTTTG TATCGACACC TGTCACGCCT TTGCCGCGGG ATACGATCTG CGCACGCCTG AAGCCTATAA AAAGACGATG GACGAATTTG ACGCCGTTAT CGGGTATGAG TTTTTATCGG CGATGCATCT AAACGACTGT AAATTCGGGC TAAATTCCAG AAAAGATCGC CATGAGAGCC TTGGGAAGGG ATTTTTAGGG CTTAAAGCGT TTGAGTGCAT AATGAACGAC GAGCACATAG GCGAGATCCC GATGATACTA GAGACGATAG ATGATAGTAT CTGGGCTGAT GAGATCAAAA TTTTAAGAAA TCTACAAAAA GGAAAAAAAT GA
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Protein sequence | MRYIGAHVSA SGGVQNAPLN AAKIGANAFA LFVKNQRQWS AKPLESAAIS EFEQNCKAAN ISPRHILPHD SYLINLGHYD DAKREQSFNA FVDEIERVSE LGLELLNFHP GSHLNEISQN ECLNLIAECM NEALKRTDGV KLVIENTAGQ GSNLGFRFEQ LAYLIERTDD KSRVGVCIDT CHAFAAGYDL RTPEAYKKTM DEFDAVIGYE FLSAMHLNDC KFGLNSRKDR HESLGKGFLG LKAFECIMND EHIGEIPMIL ETIDDSIWAD EIKILRNLQK GKK
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