Gene CCV52592_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_1442 
SymbolmnmA 
ID5407855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand- 
Start bp1517384 
End bp1518403 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content46% 
IMG OID640872976 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_001408766 
Protein GI154173866 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00222564 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA TGGTTGCTAT GAGCGGTGGC GTGGACAGCA CGATGACCGC TAAAATTTTA 
AAAGAAGCCG GCCATGAGAT AGAGGGCTGC TATATGAAGC TACATCAAAA GCCCGGCTAT 
CACGAAGAAA ACATCCGTAA GGTCAAAAAA GTCGGCGAGT ATCTTGGCAT AAAGGTGCAT 
ATTTTAGACC TGCAAGATAA ATTTAACGAA TTTGTCTACG ATCCCTTCGT TAGGCTTTAT 
AAAGAGGGCA AGACGCCAAA TCCGTGCGCG CTTTGCAACC GTTTCATAAA GCTGGGCGCG 
CTTTTGAATT TCGCCAAGCA AAACGGCTGC GAGAAGCTTG CGACAGGGCA TTACGTGCAG 
ATAATAGACG GCTTTGTCAC GATGGCGAAA GATCCGAGCA AAGATCAGAG CTATTTTTTG 
GCTCAGGTGC CAAAAGAGGT GCTAAAAGAC GTTATTTTCC CGCTTGGAGA TAAATTTAAA 
GCCGACATCA AGGAGCTTGC GCGTGAAGTG CCCGTGCTAA ACGAGTTTGC CACGCAGCCT 
GAGAGCAGCG AAATTTGCTT CGTAGAAGAT ACTTATATCG AAATTTTAAA TAAGCATTAC 
AACACGAATT TACCGGGCAA CGTCGTCGAT AAAAACGGCA ACGTCATCGG CCGTCATCAA 
GGCTATATGC ATTACACGAT CGGCAAGAGG CGCGGCTTTG AGGTCTTTGG TGCGCATGAG 
CCGCATTTCG TGTTAAAGAT AAATGCCGAT AAAAACGAGA TAGTCGTTGG TAGCAAGGAC 
GATCTGGCAC AAAAGATCGT CGAGCTTGAA AATGTGAATT TATTCATTGA TGAGGATGAG 
TTTGAGTGTG AGACGAAGAT AAGATATCGC AGTCCAAAGC TGGAGGCTAG TGTAAAGATC 
GATAAGCAAA ATAAAACCGC CGTAGTTGCA CTATCTCAGA ACGCTCTTGG CGTCGCGCAG 
GGGCAGCTTT GCGTGATGTA TGACGGCGAG CGCGTTATTG CGAGTGGGTT TATAAAGTGA
 
Protein sequence
MKIMVAMSGG VDSTMTAKIL KEAGHEIEGC YMKLHQKPGY HEENIRKVKK VGEYLGIKVH 
ILDLQDKFNE FVYDPFVRLY KEGKTPNPCA LCNRFIKLGA LLNFAKQNGC EKLATGHYVQ 
IIDGFVTMAK DPSKDQSYFL AQVPKEVLKD VIFPLGDKFK ADIKELAREV PVLNEFATQP 
ESSEICFVED TYIEILNKHY NTNLPGNVVD KNGNVIGRHQ GYMHYTIGKR RGFEVFGAHE 
PHFVLKINAD KNEIVVGSKD DLAQKIVELE NVNLFIDEDE FECETKIRYR SPKLEASVKI 
DKQNKTAVVA LSQNALGVAQ GQLCVMYDGE RVIASGFIK