| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1322 |
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| Symbol | |
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| ID | 5407598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | + |
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| Start bp | 306811 |
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| End bp | 307743 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640871758 |
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| Product | nickel transport system permease protein NikB |
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| Protein accession | YP_001407594 |
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| Protein GI | 154174473 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00196564 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCT ATATCTTTAG ACGGACTGCC TATATCGTGC CGATGCTCTT GGTGGTGTCG
GTTTTTATAT TTTTGATACT TCGTCTAAAC GGTACTGACG CGGCGATGAG CTATCTAAAC
GCTTCTGGTA TCTCGCCAAG TGATCAAGCT CTAGCCCACG CCAAAGAGGT GCTAGGGCTA
GATAAACCGC TCTTACAGCA ATACCTCTTA TGGCTTAAAA AGGCGCTCAC GCTTGACTTT
GGACGCTCGT ATATCACGGG CTCGCAGGTA AGTGCGGATA TGGCGTATTA TCTGCCAAAC
ACGCTAAAGC TGATCGGCTT TGCTTTGCTT CTTACGGTCG CGGTCTCTTT GCCGCTTGGA
ATTTTGTCCG CGCTTTATAA GGACAAATGG GTCGATCATA TCGTGAGGTT CATATCGTTT
TTGGGCGTGA GCACGCCGAA TTTTTGGCTG GCGCTCATAC TAATCAGCGT TTTTTCGGTG
AAATTTAAAA TTTTGCCTCC GTTTGGCACG GGTGGGCTTA GCCATATCAT CATGCCCGCC
TTTGCGATCT CGTTCATGAG TATAGCCATA AATGCGCGGC TCATACGTAC AAATATGCTA
GAGCTCATGC ATTCAAGGCA TGTTTTATAC GCAAATATGC GTGGCATCGC TAAATTTCAA
GTCATCGTCC ATTACGTTCT GAAAAACGCG CTCATACCTA TCGTCACGGC TCTTGGCATG
CACCTTGGCG AGCTCGTGGG CTCTGCGATG GTGATCGAAA ACGTCTTTGC ATACGCGGGC
ATAGGTAGAT ACACGGTCGC TGCTATCATA AACAACGACT ATCCGGTCAT CCAAAGCTTC
ATCCTTTTCA TGGCGCTGGT GTTTATAGTA AGCAACCTCA TAACCGACAT AATCTACGCA
TACATCGACC CTCGCGTGAG GCTTGCGGTA TGA
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| Protein sequence | MKSYIFRRTA YIVPMLLVVS VFIFLILRLN GTDAAMSYLN ASGISPSDQA LAHAKEVLGL
DKPLLQQYLL WLKKALTLDF GRSYITGSQV SADMAYYLPN TLKLIGFALL LTVAVSLPLG
ILSALYKDKW VDHIVRFISF LGVSTPNFWL ALILISVFSV KFKILPPFGT GGLSHIIMPA
FAISFMSIAI NARLIRTNML ELMHSRHVLY ANMRGIAKFQ VIVHYVLKNA LIPIVTALGM
HLGELVGSAM VIENVFAYAG IGRYTVAAII NNDYPVIQSF ILFMALVFIV SNLITDIIYA
YIDPRVRLAV
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