Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1321 |
Symbol | nikA |
ID | 5406623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 305273 |
End bp | 306814 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640871757 |
Product | nickel ABC transporter, periplasmic nickel-binding protein |
Protein accession | YP_001407593 |
Protein GI | 154175269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000477414 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA ATATTTTTTT GGCGTTGGTG TTGCTTTTGT CTTTTGCAAA TGCTAAAAAT ACACTGAATT TCGCTACATC TAAAAACGTA GGTCCGCTAA ACCCGCATCT TTACTCGCCA AACGAGATGT GGGCGCAAGA TATGCTTTAC GAGAGCTTGG TCGAGTATAG CGAGGATGGC AAGATCGTGC CTAAGCTAGC CGTTAGCTGG AGGATCGCCG ATGAGGGCAA AACATACGTT TTCACGCTAC GAGAAGGGGT GAAATTTAGC GACGGAGCGA GCTTTGACGC AAAGGCTGTA AAGCTAAATT TTGACGCGAT ACTGGCAAAT CGCGACCGAC ACAAATGGCT GGAGCTTGCA AATATCCTAA AAGACTGCGA GATAATAGAC GATAAAACCA TCGCCTTGCA CCTTCAAAAC GCCTATGAGC CGACGTTAAA GGAGCTTTCT TTGGTGCGTC CGTTTAGATT TATCTCGCCT TTAGCGATGA AGGACGCTAA TAGCACGAAA GACGGCATCA TAGCTCCCGT GGGGACTGGT GCTTGGAAGC TGGCTTCTAC TAAGCTTGGC ATAAACGATA TTTTCGTAAA AAATGAAAAC TACTGGGGCC AAAAGCCAAA ATTTGACGAG ATAGTCGCAA AGGTGATACC AGATCCAAAT ACAAAGGTCG TCGCGCTTCA GACGGGTGAG GTCGATCTCA TCTACGGCAA CGGGCAGATC TCTTTTGATA TGATAAACGA GCTCAAAAAA AGCTACGAGG TCAAGGTCTC GGAGCCTATG AACACACTAG TTTTGGCGCT AAATTCTAAT AAATCCCCGA CAAACGATCG CGCCGTGAGG GAGGCGCTAA ATTTAGCCGT CGATAAAAAC GCGATCGCAA ATTCCATATT TTTTGGCGTT CAAAAGAGCG CTGACGCCTT ATTTTACAGT AAGTTGCCGT ATTGTGACAT AGAGCTTAAG CCGTATAAAT TCGATAAAAA GGCCGCAAAT GAAATTTTGC AAAAAGGCGG CTGGGAGATG GGCAAAGACG GCATAAGATA CAAAGGCGGC AAGGAGCTTA AGATCGAGCT GGTTTATATC GGTACTAACG CCACGTTTAA GAGCATCGGC GAAATTTTAC AAGCCGAGCT GAAGCAAATC GGCGTAAATT TACAGCTAAA TGCCGATGAA TCTACGATAT TTTATAAAAA GCAACGCAGT GGTGATTTTG GCATGATATT TAACTCCACT TGGGGCGTGC CTTATGATCC TGTGATGTTT CTAGCCTCGA TGAGACTACC TTCTCACGCA GACTATCAAG CTCAGCTTGG ACTAAAAGAT AAAGCTTGGA TAGATGAAAA TATAAGTGAA ATTTTAAAGA CCTTCGATGA AGGCAAAAAA AGCTCGCTCA TCAAAAATGT GCTTACCAGG CTTCACGACG AGGCCGTGTA TCTGCCTATC TCACATGAGA GCATGATCTG GATATCAAAC GATAAAGTAG GCGGAGCAAG GACTAGTATC TTTCAAAATC ACTACCCGTT CAACGAAATT TATCCTAAAT GA
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Protein sequence | MIKNIFLALV LLLSFANAKN TLNFATSKNV GPLNPHLYSP NEMWAQDMLY ESLVEYSEDG KIVPKLAVSW RIADEGKTYV FTLREGVKFS DGASFDAKAV KLNFDAILAN RDRHKWLELA NILKDCEIID DKTIALHLQN AYEPTLKELS LVRPFRFISP LAMKDANSTK DGIIAPVGTG AWKLASTKLG INDIFVKNEN YWGQKPKFDE IVAKVIPDPN TKVVALQTGE VDLIYGNGQI SFDMINELKK SYEVKVSEPM NTLVLALNSN KSPTNDRAVR EALNLAVDKN AIANSIFFGV QKSADALFYS KLPYCDIELK PYKFDKKAAN EILQKGGWEM GKDGIRYKGG KELKIELVYI GTNATFKSIG EILQAELKQI GVNLQLNADE STIFYKKQRS GDFGMIFNST WGVPYDPVMF LASMRLPSHA DYQAQLGLKD KAWIDENISE ILKTFDEGKK SSLIKNVLTR LHDEAVYLPI SHESMIWISN DKVGGARTSI FQNHYPFNEI YPK
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