Gene CCV52592_1313 details

Gene Information

• Locus tag: CCV52592_1313
• Symbol: rpiB
• ID: 5407594
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: -
• Start bp: 665958
• End bp: 666407
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640872104
• Product: ribose 5-phosphate isomerase B
• Protein accession: YP_001407936
• Protein GI: 154174574
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000182185
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATAG AAAAAATCTT CATCGCGAGC GATCATGCAG GTTTTGAGCT AAAAAACGAG 
CTAAAAACGA TCCTCTCAAA TTTAGGACAC GAAGTCATCG ATCTGGGAAC TAATGATGGC 
AAAACGAGCG TCGATTATCC TGATTTTGCA CATTCGATGG CTAAAAATTT AGCTTCTAAA 
TGTTACGGAG TGCTGATATG CGGCACCGGC ATCGGTATCA GCATCGCTGC AAACAGACAC 
CAAAATATCC GCTGCGCCCT TTGTCACGAC GAATTTACCG CTCGTCTAGC AAGAGAACAT 
AACGACGCAA ATGTGATAGC CTTTGGCGCC AGAGTCATCG GTGCTGGCGT GGCTGGCGAA 
ATGCTAAAGG TATTTTTTAG CACGGAATTT CAGGGTGGCA GACATGAGCG CAGAGTCGGT 
AAGATCGAGC CAAATAAGGA AATTTCATGA 

 

Protein sequence

MDIEKIFIAS DHAGFELKNE LKTILSNLGH EVIDLGTNDG KTSVDYPDFA HSMAKNLASK 
CYGVLICGTG IGISIAANRH QNIRCALCHD EFTARLAREH NDANVIAFGA RVIGAGVAGE 
MLKVFFSTEF QGGRHERRVG KIEPNKEIS