| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1290 |
|---|
| Symbol | |
|---|
| ID | 5406989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 880848 |
|---|
| End bp | 883022 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640872340 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_001408162 |
|---|
| Protein GI | 154174190 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1203] Predicted helicases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01587] CRISPR-associated helicase Cas3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTGTAGTG AATTTTTATC GCATCCAAAT AAAGCTCTTA AATTTCATAT CTTAAATATG
ATAAATGATG GCGATGACGA GATCACAAGA CAGATAAAAC TTTTTCACGA TATTGCAAAA
CTAAAACAAA ATTTTCAAAA ATATATAAAC AATCCGAACG ATAAAATAAC AGATAAAAAT
CACTCTTTGC TTTCGGCATA TATTTTTTTA TTAAATTCCA CTTTTGACGA GCTTTCTAGT
GCATTTGGCT TTTTATCTAT CGTTTCACAT CACGGCGATG TTGAAAATTT TAGCGAGCTC
ATCGCTAATA ATAAAAATTT TGGTAAGTAT TTTGAGCTTT CGCATGAGTT TGACTTTTGG
GATGAGGTCG TAAATAACGC CTTAAATTTA GAGATTTATG CAAATTTGAA AACTGATAAA
AATGAGCTTT CAAGGACCAT AAAAGACCTT TATATCGCTA TACTTATGAA AAAGAACAAG
TTTGGTTACA CTGATTTTAT AGAGTTTAAA AAGTTATATT CATCGCTCAT ATATGCAGAT
AAATTTGAAG CGATATTTAG CGAGAAAAAA GAGGACTTAA AGCCCGTTGA AACAAATGAG
CTTGATACTT ACATTAGCAA GCTATCTTTT AATCAAAAAA GAGACGATTT TAGGCATTTT
GTACTGAGTA ATTTTGATAA AAATCATCGC CTTTTTACGC TCACTGCTCC GACTGGTTAC
GGTAAGACCT TGACTGCTTT AAATTTCGCA CTTAAATTTA AAAAAGAACG CCTGATATAC
GTGCTTCCAT TTACATCTAT CATCGATCAA ACCCATGAGA TAATCTCTAA AATTTATGAA
AATAACAAAG GAATTTTAGT CTATAAAGCC CACCATAAAA CCGCAGTAGA TGAAGATACG
CCCGAAGATC GCTATTCAAA AGTTAAATTT TTAATGGACT CGTTTAGCGG GAATTTTAAC
GTTACAACTT TGTATCAGTT TATTTTTACG ATTTTTGGAA ATAAAAATAA AGATAATGTT
AAATTTAACC AACTAAAAAA TAGTGTCGTC ATCATAGATG AAGCGCAGGC GATACCTTAT
GAATTTAGAG TCGATTTTAT GAGGCTTTGC GAGATAATTT CCCAAAAGCT TGACACTATT
TTTATATTTA TGTCTGCGAC TATGCCGATT ATGGGGGATA AATTTAAAGA AATTTCAAAT
TTGAACTATT TTAAAGAGCA AAATAGATAC GTTTTAAAAT GGCTTGATAT AAATAAAAAT
GAAGAAAATT TAATAGAAAA AATCACTCAA ACTGCGAAAA ATAAAAATAC TCTTGTCGTA
GTAAATACGA TCAAAAAAGC CCAGCAGCTA TTTTTAAAAT TTGCCGGTAA ATTCGAGTGT
TACAGTCTAA ACGGATATAT GCACGATACG CATAAGCGAG AAGTTATAAA AGGCGTGAAA
GAAGCGATAA ATTTAAATAA AAATGGCTGT GGCAAGCCTA TTTTACTCAT CTCTACGCAG
TCTATCGAAG CGGGTGTGGA TCTTGACTTT GACATCGGTT TTCGCGAGAC CGCTCCGATA
AGCTCCATTA TACAAACTGC CGGCAGGATC AACCGAAATT TTGGCGATCA AGGCGTGCTT
TATGTATTTG AGGATATTTG CGGGTATTCA GATCCGATTT ACGGCGATTT AAAAACAATA
AGCGATGCAA TTTTAAAAGA TACACTTTTG CAAAACGATG TAGAAGAAAA AGATATTTTA
AGTATCGTAA CGAAGTATTT TAAAAGCTTA AAAGAGCATC TTGAAAGAGC GTTTGTTGAG
CAAGAGATGA AAGAGCTTGC ATTTTACGAT ATAAATGAAA AAATAGATAA AGCTATGAAC
GACGAATATA AAATGACCGT CATTATCGAG CCTCGGAGCG AATTTATAAA AGAATTTGAA
GCTAAAATTT TTGCTATTAA CGCAGATGAA AATTTAGATA AATTCGCAAG ACTTGATATT
TTTAAAGATA CGATCAAACA AATTTCAAAA TTTAGCATAA ATGTTTCAAA AATTGATGCC
GATGAGTTAA ATTTAAGAGC CGTAAGGGCG CTAAAAGAGG TTTATTATCT GCCTTTCGGA
GATACGGCGT ATAATGAAAA ATTCGGGCTT AAAAAAGATA TGGATTTTAA TGCTTTAAAT
GAGGCTTTCG ACTGA
|
|---|
| Protein sequence | MCSEFLSHPN KALKFHILNM INDGDDEITR QIKLFHDIAK LKQNFQKYIN NPNDKITDKN
HSLLSAYIFL LNSTFDELSS AFGFLSIVSH HGDVENFSEL IANNKNFGKY FELSHEFDFW
DEVVNNALNL EIYANLKTDK NELSRTIKDL YIAILMKKNK FGYTDFIEFK KLYSSLIYAD
KFEAIFSEKK EDLKPVETNE LDTYISKLSF NQKRDDFRHF VLSNFDKNHR LFTLTAPTGY
GKTLTALNFA LKFKKERLIY VLPFTSIIDQ THEIISKIYE NNKGILVYKA HHKTAVDEDT
PEDRYSKVKF LMDSFSGNFN VTTLYQFIFT IFGNKNKDNV KFNQLKNSVV IIDEAQAIPY
EFRVDFMRLC EIISQKLDTI FIFMSATMPI MGDKFKEISN LNYFKEQNRY VLKWLDINKN
EENLIEKITQ TAKNKNTLVV VNTIKKAQQL FLKFAGKFEC YSLNGYMHDT HKREVIKGVK
EAINLNKNGC GKPILLISTQ SIEAGVDLDF DIGFRETAPI SSIIQTAGRI NRNFGDQGVL
YVFEDICGYS DPIYGDLKTI SDAILKDTLL QNDVEEKDIL SIVTKYFKSL KEHLERAFVE
QEMKELAFYD INEKIDKAMN DEYKMTVIIE PRSEFIKEFE AKIFAINADE NLDKFARLDI
FKDTIKQISK FSINVSKIDA DELNLRAVRA LKEVYYLPFG DTAYNEKFGL KKDMDFNALN
EAFD
|
|---|
| |