Gene CCV52592_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_1287 
Symbolcas 
ID5406787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand- 
Start bp879066 
End bp880064 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content49% 
IMG OID640872337 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_001408159 
Protein GI154174048 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0188131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA GCGACAGGAC GCACTTTATA TTAAGCAGCG GGCGGCTTAG GCGACAGGAT 
AACAACATCT ATTTTGATAA ATTTGACGAG ACAGGCGGCG TGACGGCGAG TAAAATTTTA 
CCGATCAACG CCATAGATGA AATTTACATC CTCACCCGTG TGGAGCTCGA CACATACACG 
CTCGCGTTTT TGGCGGATAA TAACATACTT TTGCACGTTT TTAGCCCGTT TCAGAGCTTT 
CGGGGGAATT TTTACCCGAG CACCTCAAAC TCGGTCAATA AAAGCGGCTT CGCGCTGCTG 
TCTCAACTGC GGGCGTTTGA CGACCCCGTA AAGCGCGTCT ATATCGCTCG CGAAATCACC 
CGCGCGCACA TGCTAAACGA CGCGGCAAAC TGCAAAAAGC ACGGCGTGAA ATTTGACCCC 
GCGCCGCACA TCGCAGCACT TGACGCCGCC GCAGACGTAG GACAGATAAT GGCGGCGGAA 
GGGGCATTTC AAAAGCTTTA TTATGAAAAA TGGAACGAAA TTATCGCTGA TCAGCGAAGC 
TTTAAATTTA CCGTCCGCTC CAAGCGCCCG CCCGCCGATA AGATAAATAG CTTCATCAGC 
TACGTAAATA CGCGCATTTA TAACGTCTGC CTGAGCGAAA TCTACAAGAC CGAGCTTGAT 
CCGCGCATCG GCTTTTTGCA CGAGCCAAAC TACCGCGCGC TTAGCCTGCA CCTTGATCTA 
GCAGAGATAT TTAAGCCGAT TTTGGGCGAT ACGCTGATAT TTGCGATGCT AAATAAAAAG 
GAGATCACGG CAAAGGACTT TCAAACGGAC GCCGGACGGA TAAAATTTAG TAATGACGCC 
ATCCAAAAGA TCGAGATGAA GATGATCTCT CGCCTAAGCG AAACGATCGC GCTAAACGGG 
CAAAACCTCA CGTGGCGGCA AGTCATCAGA CGCGAGGCAA ACCAGCTCAA AAAATGTATC 
TGTGAGGATA TGCCTTACGT GGGGTTTGTG TGGGGATGA
 
Protein sequence
MQKSDRTHFI LSSGRLRRQD NNIYFDKFDE TGGVTASKIL PINAIDEIYI LTRVELDTYT 
LAFLADNNIL LHVFSPFQSF RGNFYPSTSN SVNKSGFALL SQLRAFDDPV KRVYIAREIT 
RAHMLNDAAN CKKHGVKFDP APHIAALDAA ADVGQIMAAE GAFQKLYYEK WNEIIADQRS 
FKFTVRSKRP PADKINSFIS YVNTRIYNVC LSEIYKTELD PRIGFLHEPN YRALSLHLDL 
AEIFKPILGD TLIFAMLNKK EITAKDFQTD AGRIKFSNDA IQKIEMKMIS RLSETIALNG 
QNLTWRQVIR REANQLKKCI CEDMPYVGFV WG