| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1282 |
|---|
| Symbol | |
|---|
| ID | 5406122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 875381 |
|---|
| End bp | 876289 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640872332 |
|---|
| Product | putative integral membrane protein |
|---|
| Protein accession | YP_001408155 |
|---|
| Protein GI | 154174809 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000143985 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCG TGCCGTTATT TTCTATATTT GTCGTTATCG CTACCGGCTT TTTTGCTAAA
AAGATCGGTC TTCTTGAACA AAAACACTCT ATCGTATTCG TAGATTTCGT GCTTTGCTTC
GCTATCCCTG CGTTGATATT TGATAAAATT TATCACGTAA ATGTCGATAC CTCGCTGATA
AATACCATAC TTGCCGGCTT TAGCTCCAGC GTCATCAGTG CGGTCATCGC ATTTGGACTT
GGCGTTTTGC TTAAATTTTC AAAAGCGACT ACCGTCAGTA TGATAATGCT AAGCCTCTTT
GGAAACACAC TATTTGTCGG TATGCCGGTA GCTCAGGGCT TTTTTGGCGA CGAGATGCTA
AATGAGGTCA TATTTTACGA TCAGCTAGCT ACTTCGATCC CACTTTCTAT CCTTGGGCCA
CTCATCCTAT CTTTTGGCGC TCCGGAAAAG GTCTCGCTCT TTCAAAATGC GATGAAAATT
TTAAAATTCC CGCCTTTTAT AGCGCTCATC ATCGCCTTTG CAGTTAAAGG CATCTATGTA
CCGGAATTTA TATTCGCTCC GTTTAGGATG CTTGAAGGCA GCGTGACACC AGTCGCACTT
TTTGCCATAG GCGTGGGACT TAGCTTTGGC AGTATAACAA GCTCATATAA GAGTGCAAGC
ATAGTTTTGA TCTGCAAGAT GGTGCTTCCG GCACTAATCT TTTTCATAAT AATGAAAATT
TTAGGCGTCT CGATGAACAA AACCTGGCTG GTAGGCCTAT TTCAATGCTG TATGCCTCCT
ATGGTGCTAG CTAGCGCGAT GGTCATCAAG GCCGGTCTAG ACAGCTCGCT AGCCATCTCC
TCGGTCGCAC TCGGCGTTGC ATTTAGCTTC GTCACGCTTC CGGCACTATT TTATATATTT
GGTATCTAA
|
|---|
| Protein sequence | MNFVPLFSIF VVIATGFFAK KIGLLEQKHS IVFVDFVLCF AIPALIFDKI YHVNVDTSLI
NTILAGFSSS VISAVIAFGL GVLLKFSKAT TVSMIMLSLF GNTLFVGMPV AQGFFGDEML
NEVIFYDQLA TSIPLSILGP LILSFGAPEK VSLFQNAMKI LKFPPFIALI IAFAVKGIYV
PEFIFAPFRM LEGSVTPVAL FAIGVGLSFG SITSSYKSAS IVLICKMVLP ALIFFIIMKI
LGVSMNKTWL VGLFQCCMPP MVLASAMVIK AGLDSSLAIS SVALGVAFSF VTLPALFYIF
GI
|
|---|
| |