| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1226 |
|---|
| Symbol | |
|---|
| ID | 5406315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 416378 |
|---|
| End bp | 417436 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640871859 |
|---|
| Product | NAD-dependent epimerase/dehydratase family protein |
|---|
| Protein accession | YP_001407694 |
|---|
| Protein GI | 154175190 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.216313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT TAGTGACGGG AACGGCCGGT TTTATCGGCT TTCATCTGGC AAATGCGCTG
GCTGCGCGTG GCGATGAGGT CGTGGGGTTT GACAATATCA ATGATTATTA CGATGTAAAT
TTAAAATTCG CGCGGCTAAA AACGGCCGGC TTTGATACGA ACGAGATCGC GGCGGGCAAG
CAGATCCGCT CCAAAATGAA GCCAAATTTA AGCTTCGTAA AGGGTGATCT GCAAGAGGCT
CGGCTACTAA AAAGGCTATT TGGCGAGCAT AAATTTGACG CCGTGGTAAA TCTCGCCGCG
CAAGCTGGCG TGCGCTACTC GCTAATCAAT CCGCAAGCCT ACATCGACGC TAACGTCACG
GGCTTTTTAA ATATTTTGGA GTGCTGCCGC CACAACGCGA CGCCAAATCT TGTCTATGCG
AGCTCGAGCT CGGTGTATGG ACTCAACGAA AATATGCCAT TTTCCACGCA TGAGGGCGTA
AATCACCCGA TCAGCCTCTA CGCCGCGACC AAAAAGAGCA ACGAGATGAT GGCGCACACT
TACAGCCATC TTTTTGGCGT GCCGACGACG GGGCTGCGAT TTTTCACGGT CTATGGCCCG
TGGGGTCGCC CAGATATGGC GCTGTTTTTG TTCGTTAAAG CCGCGCTTAG TGGCGGGACG
ATCGATGTTT TCAACTACGG CAAGATGAAG CGCGACTTCA CCTATATCGA CGACATCGTA
AAGGGCGTGA TGAAGTGCGT GGATAACCCG GCCCGCGCAA ACGCCGCGTG GGACGCGAAA
GCACCTGATC CGGCAAGCTC GTCCGCGCCA TTTAAAATTT ACAATATCGG CAACAATAGC
CCCGTCGAGC TAATGGACTA CATCAAGGCG ATCGAGCTAA AAATCGGACG CGAGATAAAT
AAAAATTTCC TTCCGCTGCA AGCTGGCGAC GTGCCTGCGA CGTATGCGGA CGTGAGCGAT
TTGATCGCTG ATTTTGACTA CAAGCCAAAC ACCAGCGTAA ATGAGGGTGT AGCGCGCTTT
ATCGAGTGGT ATAGTGAGTT TTACGGAGCT AAAATTTGA
|
|---|
| Protein sequence | MKILVTGTAG FIGFHLANAL AARGDEVVGF DNINDYYDVN LKFARLKTAG FDTNEIAAGK
QIRSKMKPNL SFVKGDLQEA RLLKRLFGEH KFDAVVNLAA QAGVRYSLIN PQAYIDANVT
GFLNILECCR HNATPNLVYA SSSSVYGLNE NMPFSTHEGV NHPISLYAAT KKSNEMMAHT
YSHLFGVPTT GLRFFTVYGP WGRPDMALFL FVKAALSGGT IDVFNYGKMK RDFTYIDDIV
KGVMKCVDNP ARANAAWDAK APDPASSSAP FKIYNIGNNS PVELMDYIKA IELKIGREIN
KNFLPLQAGD VPATYADVSD LIADFDYKPN TSVNEGVARF IEWYSEFYGA KI
|
|---|
| |