Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1184 |
Symbol | kdsA |
ID | 5407829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 462587 |
End bp | 463393 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640871900 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_001407735 |
Protein GI | 154174222 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTAA TAGCAGGTCC TTGCGTCATC GAGAGCGAAA AACTCGTATT TGACGTGGCG AAAAGGCTCG TTAAATTTAA CGAAGACGCG CGGATAGATT TTTATTTTAA GTCAAGCTTT GATAAGGCAA ATCGCACGAG TATCAGCTCT TTTCGCGGTC CGGGACTCGA AAAAGGCTGC GAAATTTTAG CCAAGGTCAA AAAGGAATTT GGCTTTAAAA TTTTGACCGA CATCCACGAG AGCTATCAGG CTGCGCCCAT GGGCGAGGTC GCTGACGTGC TGCAAATCCC AGCCTTTTTG TGCCGTCAGA CCGACCTGCT CGTGGCGGCT GCGAGGACAA AAGCGGTCGT AAATATCAAA AAGGGGCAGT TTTTAGCCGC CAGTGCGATG AAGCACTCGG TCAAAAAAGT GCTCGAAACC AGAGGCATTA GCGGTGATGG CTACGAGCTC GCGCGGCAAA ACGGCGTGTG GCTGACCGAG CGAGGCAGCA CCTTTGGCTA CGGCAATCTC GTCGTCGATA TGCGAAATTT GGTGCTTATG CGTGAATTTG CGCCGGTGAT ATTCGACGCG ACGCACAGCG TGCAGATGCC CTCAGCCCTT GGCGAGAAGA GCGGCGGCGA CGCGAAATTC GTGCCATATC TCGCGCGAGC AGCAGCGGCT GTGGGTGTGG ATGGCTTTTT TTATGAGACG CATATCAATC CTTGCGAAGC CCTTTGCGAC GGGCCGAATA TGCTAAATTT AGACGAGCTG GACGCAAATA TAAATGAAAT TTTTAGGATA CAAGAGGCGC TAAATTTTGC GAAATAG
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Protein sequence | MILIAGPCVI ESEKLVFDVA KRLVKFNEDA RIDFYFKSSF DKANRTSISS FRGPGLEKGC EILAKVKKEF GFKILTDIHE SYQAAPMGEV ADVLQIPAFL CRQTDLLVAA ARTKAVVNIK KGQFLAASAM KHSVKKVLET RGISGDGYEL ARQNGVWLTE RGSTFGYGNL VVDMRNLVLM REFAPVIFDA THSVQMPSAL GEKSGGDAKF VPYLARAAAA VGVDGFFYET HINPCEALCD GPNMLNLDEL DANINEIFRI QEALNFAK
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