| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1179 |
|---|
| Symbol | pyrF |
|---|
| ID | 5406401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 465136 |
|---|
| End bp | 465816 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640871905 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_001407740 |
|---|
| Protein GI | 154174269 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTCT GCGTGGCGCT TGATATGGCG AGTAAGGAGG CAAATCTAGC CCTTGCGCAC
GAGCTATCCG GGCTTGACGT GTGGCTAAAA GTCGGACTTC GCGCGTATCT AAGGGACGGG
GCGAAATTTA TCGAAGAGCT AAAAGGCGTG ACGGATTTTA GGGTTTTTCT CGACCTAAAA
CTTTACGACA TCCCAAACAC GATGGCGGAC GCAGCCGAGG TCATCGCCAA GGTCGGCGTC
GATATGATAA ATCTGCACGC AAGTAGCGGC ACGCATGCGA TGCGGACTGT GATGTCGCGG
CTAAATGCGC TGCCGTCGCG CCCTTTAGTG CTGGCGGTCT CGGCTCTAAC AAGCTTTGAC
GAGAGCGAAT TTAGCGCGGT TTATAATGAA AATTTAGCCG CCGCCGTGCG TAAATTTAGC
GTGATGAGCT ATGAGGCGGG GCTTGACGGG ATGGTCTGCT CGGTGTTTGA AAGCCGCTTG
ATAAAGGACA CGACGAGTAC GGACTTTCTT ACCTTGACGC CCGGTGTGCG CCCCTTTGGC
GAGAGTGCAG ACGATCAAAA GCGAGTGGCT GATTTGAGCG CGGCAAAGGA GCAGGGCAGC
GACTTTATCG TGGTCGGACG CCCGATATAT GAAAGCAACG AACCGCGTGA AATTTGCGAG
CGGATACTGG GGAAAATTTA G
|
|---|
| Protein sequence | MKLCVALDMA SKEANLALAH ELSGLDVWLK VGLRAYLRDG AKFIEELKGV TDFRVFLDLK
LYDIPNTMAD AAEVIAKVGV DMINLHASSG THAMRTVMSR LNALPSRPLV LAVSALTSFD
ESEFSAVYNE NLAAAVRKFS VMSYEAGLDG MVCSVFESRL IKDTTSTDFL TLTPGVRPFG
ESADDQKRVA DLSAAKEQGS DFIVVGRPIY ESNEPREICE RILGKI
|
|---|
| |