Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1150 |
Symbol | |
ID | 5406891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 939765 |
End bp | 941681 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640872393 |
Product | hypothetical protein |
Protein accession | YP_001408213 |
Protein GI | 154174992 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.216644 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGTGAGA TAACGCAGGA ACAAGAAAAT TTTTTATCGC CCGTTCAGGT CGAGACGTCG ACCCCTTATG CTAAGCTAAA GGAGCTTAGC AAGCAAAACC AGATACCGAT CGAATTCATC GACTTTCGCA TAAAAAATAT ACTCACTACC TACACGAACG AGCAAAATTC AGACCCTGTC TTGGTCGGGC AGGACGATCT TAGGATATTT GACGATGATG ACTTTTTCCT TGATCCTACG CTAGCGATCG AGCAAAGATA TGAAGTGGAA TTTTTCGACA CGAGGATAAA TAATGCACCA AAGCTGCCAA AGATCAGTAT AGGCGTAAAT CCTCTGATAA CAAAGATCGT GGCGACGATC CACAAGTCAA ACGAGTGCGT TTATGAGACG AACTACGAGC AAAAGCTCTT TGACTACATC GCCAAGCAGC TCATAAAGGC GCAAATTTTG ATCGGCATAA GGACTGGTAA AAGTAAAGAG GAGCTGACTA AGATCGCCTC CGTTTTGCGC GTGATGGATC AGATAGATCA AGACTACACG ATAAATTTCG CAAGCGGGGT AAATCCTATA AAAGCCATCG ATGCAAAGAC CATCTACTAC TACAAAAATA AGCTTGACAG CCTGAAAAAA GACGACAAGA TAGACTATGC AAATCGCGGA TTTTTATTTG GTGTGGCTGC AGGCGAAGTG ATAATGGAGC AAAAAAGGTC ACATGTAGGG CGTGACGGTC GCGATCTAAG AGGTAAATTT ATAAAGACTC CGGATCCCAA AGAAGACGGC GCTACGGACA TCAGTGTGAC TGAGAATATC GAACGTAAAG AGGACGCCGA GGGCGTTAAA TTTATCGCCA AAAAAGCAGG CTATGTCGTA GAGAATAAGG GGACGTTTGA CATAGAGGAG CGCCTCGAGA TCAATGAGGT AAATTTCAAA ACCACGGGCT CTATCCAGGC TGGAGTCGAT ACGAACGTGA CCCTGGTCGT AAAAGAGACC GACCTCATAA AAGACGCGAT AGGCACGGGC GTCATAGTAG AGGCCGATGA CGTGCAGGTA AAGGGCAATA TCGGTGCAAA CGCTATCATA AAAGCAAACG AGGTCACTAT CGGCGGACAG ACGCATCAAA AGGCTAAAAT TTACGCCAAA AACGCAAACA TCGCTACGCA TATAGGCTAC GTCGAAGCCG AAAACGTCGA GATAGACAGA CTAGAAGGCG GTAGCGTCCT TGCTAAAAAG GTCAAAGTTA AAAGCGTCGT AGGCGGCTCG ATAACGGCTC AAATCATACA AATAGAAACG CTTGGCTCAA ACTGCACCAT CACGGCGGCT CACCTCATCG ATATAAAATA TCTGCGCGGC ACCGGCAATC GCTTCATAAT CGACGCCAGC AAGATGAAAG AGCGAAGCGA CGAGACGGAC GAACAGCTTG ATAAGATAGA AGAGATCAAA CGAGAGCTAA GCCAGATGCC AAAAAGACTG GAAGCCAAAA AAACGGTCAT AGACGAAAAC AAAGGCTCGA TATACACCAT AAAAGCCAAG GTCGAGGAGC TTTCGCGCGC TAAAGTGATC CCGCCGGTGA CCTTCATGAA AAAGCTAAAA GAGTATCAAG AGCTGGTAAA CGACTACAAC GCGCTTTTAA AAGAATTTAG AAGTAAAAAA GAGCAGGTGG CCGACCTTAG GGCGGAGCTT GAGATGATGC AAAACGGGAT TTTTTCTGCA AAGGTCATAA ATCGCGGTAA CTGGATAGAG CTAAACGAGA TACGATTCGT CCTGATCGAT CCTCCGCAAA ATATCACGTA TTCGACCAAG CAAAACGAGA CGGCACGCGT CATCAGCCTG GAAAAGGTAG AAAATTTCGA CGGCAAGGTC GAGTATAAGG TCAAAAAGTC AAATCAGCTT GAAGACTTTG AAAACACAAG CTTTTAA
|
Protein sequence | MSEITQEQEN FLSPVQVETS TPYAKLKELS KQNQIPIEFI DFRIKNILTT YTNEQNSDPV LVGQDDLRIF DDDDFFLDPT LAIEQRYEVE FFDTRINNAP KLPKISIGVN PLITKIVATI HKSNECVYET NYEQKLFDYI AKQLIKAQIL IGIRTGKSKE ELTKIASVLR VMDQIDQDYT INFASGVNPI KAIDAKTIYY YKNKLDSLKK DDKIDYANRG FLFGVAAGEV IMEQKRSHVG RDGRDLRGKF IKTPDPKEDG ATDISVTENI ERKEDAEGVK FIAKKAGYVV ENKGTFDIEE RLEINEVNFK TTGSIQAGVD TNVTLVVKET DLIKDAIGTG VIVEADDVQV KGNIGANAII KANEVTIGGQ THQKAKIYAK NANIATHIGY VEAENVEIDR LEGGSVLAKK VKVKSVVGGS ITAQIIQIET LGSNCTITAA HLIDIKYLRG TGNRFIIDAS KMKERSDETD EQLDKIEEIK RELSQMPKRL EAKKTVIDEN KGSIYTIKAK VEELSRAKVI PPVTFMKKLK EYQELVNDYN ALLKEFRSKK EQVADLRAEL EMMQNGIFSA KVINRGNWIE LNEIRFVLID PPQNITYSTK QNETARVISL EKVENFDGKV EYKVKKSNQL EDFENTSF
|
| |