| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1137 |
|---|
| Symbol | |
|---|
| ID | 5405983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 922439 |
|---|
| End bp | 923221 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640872381 |
|---|
| Product | 7-alpha-hydroxysteroid dehydrogenase |
|---|
| Protein accession | YP_001408201 |
|---|
| Protein GI | 154173801 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAA ATGAATTTTT GGGAAAAACG CTAGTCATAA GTGGCGGCAC ACGCGGTATC
GGACGAGCCA TCGTGGAGGA ATTTGCAAAT GCCGGCGCAA ACATCGCCTT CACCTACAAC
TCGAACGAAG AGCTGGCAAA AAACGAAGCT AAGGAGCTCG AGACTAAATT TAAGATAAAA
GCCCGCACCT ACGCGCTAAA TATCCTTGAG CCGGAGACTT ACAAGGAGCT TTTTTTAAAG
ATCGACGAGG ACTTTGATCG CGTTGATTTT TTCATCTCAA ACGCTATCAT TTCAGGACGT
GCGGTCGCCG GCGGATACAC CAAATTTATG AAGCTAAAGC CTAGAGGCAT CAACAATATC
TTTACCGCGA CCGTGAATGC CTTTGTCGTG GGCGCTCAGG AGGCCGCCAA ACGTATGGAA
AAAACGGGCG GCGGAAGCAT CATCAGCCTT AGCTCTACGG GGAATTTAGT CTATATAGAA
AACTACGCCG GACACGGTAC TGCCAAGGCT GCGGTCGAAG CGATGGCAAG ATACGCCGCG
ACCGAGCTTG GCGAGAAAAA TATCCGCGTG AATGTCGTTA GTGGCGGGCC GATCGAGACC
GACGCACTGC GAGCCTTTAC AAACTACGAA GAGGTGCGCG ACAAAACGGC CGAGCTAAGC
CCGCTAAATC GCATGGGGCA GCCGACCGAC CTTGCAGGCG CATGTCTTTT CCTTTGCTCG
TCAAAAGCGA GCTGGGTGAC CGGACATACA TTTATAATAG ACGGTGGAAC GACATTTAAA
TGA
|
|---|
| Protein sequence | MDKNEFLGKT LVISGGTRGI GRAIVEEFAN AGANIAFTYN SNEELAKNEA KELETKFKIK
ARTYALNILE PETYKELFLK IDEDFDRVDF FISNAIISGR AVAGGYTKFM KLKPRGINNI
FTATVNAFVV GAQEAAKRME KTGGGSIISL SSTGNLVYIE NYAGHGTAKA AVEAMARYAA
TELGEKNIRV NVVSGGPIET DALRAFTNYE EVRDKTAELS PLNRMGQPTD LAGACLFLCS
SKASWVTGHT FIIDGGTTFK
|
|---|
| |