Gene CCV52592_1085 details

Gene Information

• Locus tag: CCV52592_1085
• ID: 5405943
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: +
• Start bp: 988325
• End bp: 990253
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640872430
• Product: macrolide export ATP-binding/permease protein MacB
• Protein accession: YP_001408250
• Protein GI: 154173690
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGAGC TAAAAAATAT CGTCAAAAAA TTTAAAGTAG GCGATAGCGA TATCGAAATT 
TTACATAGCA TAAATTTAAG CATCAAAAAG GGAGAATTTA TCGCTATCAT CGGCCAGTCG 
GGCTCCGGTA AATCGACACT GATGAATATT TTAGGCTGTC TTGATAGTCC AAGTAGCGGG 
CAGTACCTGC TAGATGGCGC TGATATATCA AATTTCGACT CCGATGCTCT GGCTAAGCTT 
AGACGCAATA AATTTGGCTT CATCTTTCAA AGATATAACC TACTCGCCAC GATGAACGCT 
CTACAAAATG TCGCACTTCC AAGCGTTTAT GCAGGCGTGG ATAAAAAAAA TAGAGAGCAA 
AGAGCGCATG AAATTTTAGC CTCGCTCGAG CTTGACGATA AGGCGCAAAG CCTACCAAAT 
AAGCTCTCAG GCGGTCAGCA ACAGCGCGTA TCTATCGCAA GGGCACTGAT AAATGGCGGT 
GAGATAATCC TAGCCGATGA GCCGACCGGA GCGCTTGATA GCAAGAGCGG TCTAAAAGTG 
ATGGAAATTT TAGTAAATTT ACATAAGCTC GGACACACCA TAATCATCGT CACACACGAT 
CCAAAGATCG CCGAATACGC AAACCGCGTC ATCGAGATAA AAGATGGCAA CATCATTAGC 
GATACGACAA AAAAAGATGA AATTTTTACC GCAAAAAAAC ACGATGCACC GCAAAAAAGC 
GCTTTTGTCT ATTACAAAGA TCAGCTCATA GAAAGCTTTA AAATGTCCAT CAGTGCGATG 
CTCTCTCATA AGTTGCGCTC GCTACTTACG ATGCTAGGCA TCATCATCGG TATCGCAGCC 
GTCATCAGTG TCGTGGCACT GGGCAAAGGC TCGCAGGAGC AAATTTTAGC CGGCATCCGC 
AAAATCGGTA CGAATACGAT AGACATAATG CCGGGCAAAG GCTTTGGCGA TATGCGCTCA 
GGACGCGTAA AAACGCTAGT CATTAGTGAC GCGCAAATGC TAGAGAAACA GCCTTTTTTG 
GAGTCCGTCA CGCCAAATAC CAGCACCAGC GGGACACTGA CTTATGAAAA CATATCGCTA 
AGTGCGAGCC TAAGGGGCGG GGGCTCTGGT AGCTTTGATG TAAACGGCCT TAAGCTCGCA 
AGCGGCAGAC TCTATGACGA TGATGAGGTC GCATCCTCGG CATCCGTCGC AGTCATTGAT 
CATACGACTA AAATTTCAGT CTTTCCAAAT ATTGATCCGA TCGGCAAGAT AATCCTTTTT 
AACAAAAAGC CGCTTAGAGT GATCGGCGTT TTACAAAAAG ACGACTTTAC CTTCGGTGAC 
GCCAGTACGC TTAAAATTTA CGCCCCTTAC ACGACCGTGA TAAACAAAAT CACCGGCGAT 
AAATACATAA GCTCGATAAC AGTGCGCGTA AAAGAGAGCG TAAATGCACA AGTGGCCGAA 
AAAAGTCTCA CCGAGCTTTT AACAATAAAG CACGGAAAGC AAGACTTTTT TACTAGAAAT 
TCAGATAGTA TCAAACAAAC GATAGAGGAG ACGATCTCTA CGATGAGACT GCTGATATCC 
AGTATCGCGC TCATCTCGCT CATCGTGGGT GGTATAGGCG TGATGAATAT CATGCTAGTT 
TCAGTAACTG AGCGCACCAA AGAGATCGGC ATCAAAATGG CAATAGGCGC TAGGCAGAGC 
AATATCTTGC AGCAGTTCTT GATAGAGGCG GTCCTGCTTT GTTTGATCGG CGGAGCGATC 
GGCATAGCGT TTTCTTATGT GATCGGCTAT GTTTTTAATA ACTTTTTAGA GGGATTTAGC 
ATGATCTTTT CAAACGCTTC TATCGTCGTC GCTCTCGTGA CATCGATGGC GATAGGCATC 
ATCTTTGGCT ATATGCCAGC TAAAAACGCC TCAAAACTAA ATCCGATCGA CGCACTTTCA 
AGGGAATAA 

 

Protein sequence

MIELKNIVKK FKVGDSDIEI LHSINLSIKK GEFIAIIGQS GSGKSTLMNI LGCLDSPSSG 
QYLLDGADIS NFDSDALAKL RRNKFGFIFQ RYNLLATMNA LQNVALPSVY AGVDKKNREQ 
RAHEILASLE LDDKAQSLPN KLSGGQQQRV SIARALINGG EIILADEPTG ALDSKSGLKV 
MEILVNLHKL GHTIIIVTHD PKIAEYANRV IEIKDGNIIS DTTKKDEIFT AKKHDAPQKS 
AFVYYKDQLI ESFKMSISAM LSHKLRSLLT MLGIIIGIAA VISVVALGKG SQEQILAGIR 
KIGTNTIDIM PGKGFGDMRS GRVKTLVISD AQMLEKQPFL ESVTPNTSTS GTLTYENISL 
SASLRGGGSG SFDVNGLKLA SGRLYDDDEV ASSASVAVID HTTKISVFPN IDPIGKIILF 
NKKPLRVIGV LQKDDFTFGD ASTLKIYAPY TTVINKITGD KYISSITVRV KESVNAQVAE 
KSLTELLTIK HGKQDFFTRN SDSIKQTIEE TISTMRLLIS SIALISLIVG GIGVMNIMLV 
SVTERTKEIG IKMAIGARQS NILQQFLIEA VLLCLIGGAI GIAFSYVIGY VFNNFLEGFS 
MIFSNASIVV ALVTSMAIGI IFGYMPAKNA SKLNPIDALS RE