Gene CCV52592_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_1085 
Symbol 
ID5405943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand
Start bp988325 
End bp990253 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content45% 
IMG OID640872430 
Productmacrolide export ATP-binding/permease protein MacB 
Protein accessionYP_001408250 
Protein GI154173690 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGC TAAAAAATAT CGTCAAAAAA TTTAAAGTAG GCGATAGCGA TATCGAAATT 
TTACATAGCA TAAATTTAAG CATCAAAAAG GGAGAATTTA TCGCTATCAT CGGCCAGTCG
GGCTCCGGTA AATCGACACT GATGAATATT TTAGGCTGTC TTGATAGTCC AAGTAGCGGG
CAGTACCTGC TAGATGGCGC TGATATATCA AATTTCGACT CCGATGCTCT GGCTAAGCTT
AGACGCAATA AATTTGGCTT CATCTTTCAA AGATATAACC TACTCGCCAC GATGAACGCT
CTACAAAATG TCGCACTTCC AAGCGTTTAT GCAGGCGTGG ATAAAAAAAA TAGAGAGCAA
AGAGCGCATG AAATTTTAGC CTCGCTCGAG CTTGACGATA AGGCGCAAAG CCTACCAAAT
AAGCTCTCAG GCGGTCAGCA ACAGCGCGTA TCTATCGCAA GGGCACTGAT AAATGGCGGT
GAGATAATCC TAGCCGATGA GCCGACCGGA GCGCTTGATA GCAAGAGCGG TCTAAAAGTG
ATGGAAATTT TAGTAAATTT ACATAAGCTC GGACACACCA TAATCATCGT CACACACGAT
CCAAAGATCG CCGAATACGC AAACCGCGTC ATCGAGATAA AAGATGGCAA CATCATTAGC
GATACGACAA AAAAAGATGA AATTTTTACC GCAAAAAAAC ACGATGCACC GCAAAAAAGC
GCTTTTGTCT ATTACAAAGA TCAGCTCATA GAAAGCTTTA AAATGTCCAT CAGTGCGATG
CTCTCTCATA AGTTGCGCTC GCTACTTACG ATGCTAGGCA TCATCATCGG TATCGCAGCC
GTCATCAGTG TCGTGGCACT GGGCAAAGGC TCGCAGGAGC AAATTTTAGC CGGCATCCGC
AAAATCGGTA CGAATACGAT AGACATAATG CCGGGCAAAG GCTTTGGCGA TATGCGCTCA
GGACGCGTAA AAACGCTAGT CATTAGTGAC GCGCAAATGC TAGAGAAACA GCCTTTTTTG
GAGTCCGTCA CGCCAAATAC CAGCACCAGC GGGACACTGA CTTATGAAAA CATATCGCTA
AGTGCGAGCC TAAGGGGCGG GGGCTCTGGT AGCTTTGATG TAAACGGCCT TAAGCTCGCA
AGCGGCAGAC TCTATGACGA TGATGAGGTC GCATCCTCGG CATCCGTCGC AGTCATTGAT
CATACGACTA AAATTTCAGT CTTTCCAAAT ATTGATCCGA TCGGCAAGAT AATCCTTTTT
AACAAAAAGC CGCTTAGAGT GATCGGCGTT TTACAAAAAG ACGACTTTAC CTTCGGTGAC
GCCAGTACGC TTAAAATTTA CGCCCCTTAC ACGACCGTGA TAAACAAAAT CACCGGCGAT
AAATACATAA GCTCGATAAC AGTGCGCGTA AAAGAGAGCG TAAATGCACA AGTGGCCGAA
AAAAGTCTCA CCGAGCTTTT AACAATAAAG CACGGAAAGC AAGACTTTTT TACTAGAAAT
TCAGATAGTA TCAAACAAAC GATAGAGGAG ACGATCTCTA CGATGAGACT GCTGATATCC
AGTATCGCGC TCATCTCGCT CATCGTGGGT GGTATAGGCG TGATGAATAT CATGCTAGTT
TCAGTAACTG AGCGCACCAA AGAGATCGGC ATCAAAATGG CAATAGGCGC TAGGCAGAGC
AATATCTTGC AGCAGTTCTT GATAGAGGCG GTCCTGCTTT GTTTGATCGG CGGAGCGATC
GGCATAGCGT TTTCTTATGT GATCGGCTAT GTTTTTAATA ACTTTTTAGA GGGATTTAGC
ATGATCTTTT CAAACGCTTC TATCGTCGTC GCTCTCGTGA CATCGATGGC GATAGGCATC
ATCTTTGGCT ATATGCCAGC TAAAAACGCC TCAAAACTAA ATCCGATCGA CGCACTTTCA
AGGGAATAA
 
Protein sequence
MIELKNIVKK FKVGDSDIEI LHSINLSIKK GEFIAIIGQS GSGKSTLMNI LGCLDSPSSG 
QYLLDGADIS NFDSDALAKL RRNKFGFIFQ RYNLLATMNA LQNVALPSVY AGVDKKNREQ
RAHEILASLE LDDKAQSLPN KLSGGQQQRV SIARALINGG EIILADEPTG ALDSKSGLKV
MEILVNLHKL GHTIIIVTHD PKIAEYANRV IEIKDGNIIS DTTKKDEIFT AKKHDAPQKS
AFVYYKDQLI ESFKMSISAM LSHKLRSLLT MLGIIIGIAA VISVVALGKG SQEQILAGIR
KIGTNTIDIM PGKGFGDMRS GRVKTLVISD AQMLEKQPFL ESVTPNTSTS GTLTYENISL
SASLRGGGSG SFDVNGLKLA SGRLYDDDEV ASSASVAVID HTTKISVFPN IDPIGKIILF
NKKPLRVIGV LQKDDFTFGD ASTLKIYAPY TTVINKITGD KYISSITVRV KESVNAQVAE
KSLTELLTIK HGKQDFFTRN SDSIKQTIEE TISTMRLLIS SIALISLIVG GIGVMNIMLV
SVTERTKEIG IKMAIGARQS NILQQFLIEA VLLCLIGGAI GIAFSYVIGY VFNNFLEGFS
MIFSNASIVV ALVTSMAIGI IFGYMPAKNA SKLNPIDALS RE