Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1076 |
Symbol | valS |
ID | 5406519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 971570 |
End bp | 974191 |
Gene Length | 2622 bp |
Protein Length | 873 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640872424 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001408244 |
Protein GI | 154174900 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTGATT TTTACGACGC AAAGCAAACG GAAGAGAAAT TTTATAAAAT TTGGGAAGAG CGCGGATATT TCGAGATAGA CGCGAACAAA GAGATCCAAG AGCCAAATAA AAAATTTTGT ATCATGATGC CGCCTCCAAA CGTGACCGGC TCACTTCACA TCGGACATTC GCTCACTTTC ACACTTCAAG ACATCATGAC CCGCTACAAA AGGATGGACG GCTACAAGAC CCTCTGGCAG CCGGGGCTAG ATCATGCGGG TATCGCCACT CAAAACGTCG TAGAAAAGCA GCTTTTAGCT CAGGGCATAA CAAAAGAGAG TATCGGGCGC AAAGAATTTG TAAAAAAAGT CTGGCAATGG AAAGAAAAAA GCGGCGGTAT GATAGTGCAT CAAATGCGCC GTCTAGGCAT CTCTCCTACG TGGAGCAGGC AGAGATTTAC TATGGATGAG GGGCTAAAAA AGGCGGTCAA AAAAGCCTTC GTGAGCCTTT ATGAAAAAGG GCTCATCGTG CGCGAAAACT ATATGATAAA CTGGTGCACG CACGACGGAG CACTCAGCGA TATCGAGGTC GAACACAAGG AAAATAAGGG CAAGCTTTAT TATTTGCGAT ATTATTTGGC TGACGAGCCG TCTAAATTTG TGGTAGTTGC CACGACGCGC CCGGAAACAT ACTTTGGCGA TACGGCGGTA ATGGTAAATC CAAATGACGA GCGATATAAA AATTTGATCG GTCGCAAGGT CGTGCTACCT ATCATCGGGC GTGAGATCCC GATCATCGCC GACGAACATG TAGATATGGA GTTTGGAACG GGCCTAGTTA AAGTCACGCC CGCACACGAT ACGAACGACT ACGAGGTCGG CAAAAGACAT AACCTCGAAT TTATCACCGT TTTTGATGAA AAGGGCATTT TAAACGAGCA GTGCGATAAA TTTAAAGGAC TTGAAAGGCT GGCGGCACGA GAGCCCATCG TGCGCGAGCT AGAAAGGATC GGCAACGTCG AAAAGATCGA GGATTACGAC AATCAAGTAG GCTACTGCTA CCGCTGTAAA AATGTCGTCG AACCATACAT CTCAAAGCAA TGGTTCGTAA AAAAGCAGAT CGCCGACAAA GCCATCGAGG ACGTCGCGGC TGGGCTGGCT AAATTTTACC CGCCGCATTG GATAAATAGC TTTAACGCGT GGATGAGGGA GCTTCGCGAC TGGTGCATCT CGCGTCAGCT TTGGTGGGGG CATCAGATCC CGGTATTTTA CTGCGACGAG TGCGCTCACG AGTGGGCGGA TGAAGGCGAG CCGAATGAAT GCCCAAAGTG CAAAAGCAAA AATTTTCATC AAGACCCGGA TGTGCTTGAT ACGTGGTTTA GCTCGGGACT TTGGCCTTTT AGCACACTTG GCTGGGGCAA CGGCGAGGAG CTAAAAAACG AAAAATGGTT CGAGGGCGAT CTGGCTGAAT TTTACCCAAA TACCCTGCTG ATAACAGGCT TTGACATCCT CTTTTTCTGG GTCGCCAGGA TGATGTTTCA GGGGCAAAAT GCGCTAGAAA AGCTGCCGTT TGACGACATC TACCTGCATG CTCTGGTTAA AGACGAGCAA GGCAGAAAGA TGAGTAAGAG CCTTGGCAAC GTGATCGACC CGCTTGATAG CATCGAGGAG TACAGTGCGG ACATCTTGCG CTTCACGCTC GCCCTACTCG CCGTTCAGGG TCGCGACATC AAGCTAAGCG ACGAGAAAAT GAAGCTGGTT AGAAATTTTA CGAATAAGCT TTACAACGCC GGCAAATATC TGCTTTTAAA CGAGAGTAAA TTTGACGACT TAGACAAAAT CGAGGTCAAA ACGCCGCTTG GAGCGTATAT GCAAAGCCGC TTTTACGAGT GCGTGCGCGA GGTGCGCGAG AACATTGACG CGTATCGCTT CAACGACGCG GCGAATGCGC TTTATAAATT TTTATGGGAC GAGTTTTGCG ACTGGGGTAT CGAGCTAAGC AAGGCGAGCA AAGCAAGTGT CGCCGAACTG GGCGCGATAT TTAAAGAGAC GATGAAGCTT TTAAGCCCGT TTATGCCGTT TATTAGCGAA TACCTTTATC ACGAGCTTAG CAGGACAAAT TTAGAAAGCT CGGCGTCCAT AATGATCTCA CGCTATCCGC AGACAAAAGA GCGAAATTTA GAGATTGAGA AAATTTTCTC GCTCGTCATC GAAGCGATAG TCAGCATACG CCGCGCAAAG GCTACGATCG AGCTTGGCAA CTCAAAAATA GCAAAAGCTT ATGTCAAGCT TAACGGCGAC GTAAATTTAA GCGAGGCTTC AAACTACATC GCCCTACTCG CAAAGTGCGA AAATATCGAA TTTACGAGCA GCAAAATAGA CGGCGCGATC AGCGATGTGA GCGAAAATTT ACAAAGCTTC ATACCGCTTG AAGGCGTGGA TATGTCGGCA ATAATAATGC GACTGCGGTC GCAGAAAACT AAACTGGGAA AAGAGATAGC AAAACTATCG GGCATGCTAA AAAACGAGAA ATTTGTCGCC AACGCTCCGT CGGAGGTGAT AGAGGCAAAT AAATCAGGGC TTGCAAACGC GCAAGAACAG CTTAAAAAGA TAGATTCAGA GCTTATGAAA TTTGATAAAT AA
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Protein sequence | MADFYDAKQT EEKFYKIWEE RGYFEIDANK EIQEPNKKFC IMMPPPNVTG SLHIGHSLTF TLQDIMTRYK RMDGYKTLWQ PGLDHAGIAT QNVVEKQLLA QGITKESIGR KEFVKKVWQW KEKSGGMIVH QMRRLGISPT WSRQRFTMDE GLKKAVKKAF VSLYEKGLIV RENYMINWCT HDGALSDIEV EHKENKGKLY YLRYYLADEP SKFVVVATTR PETYFGDTAV MVNPNDERYK NLIGRKVVLP IIGREIPIIA DEHVDMEFGT GLVKVTPAHD TNDYEVGKRH NLEFITVFDE KGILNEQCDK FKGLERLAAR EPIVRELERI GNVEKIEDYD NQVGYCYRCK NVVEPYISKQ WFVKKQIADK AIEDVAAGLA KFYPPHWINS FNAWMRELRD WCISRQLWWG HQIPVFYCDE CAHEWADEGE PNECPKCKSK NFHQDPDVLD TWFSSGLWPF STLGWGNGEE LKNEKWFEGD LAEFYPNTLL ITGFDILFFW VARMMFQGQN ALEKLPFDDI YLHALVKDEQ GRKMSKSLGN VIDPLDSIEE YSADILRFTL ALLAVQGRDI KLSDEKMKLV RNFTNKLYNA GKYLLLNESK FDDLDKIEVK TPLGAYMQSR FYECVREVRE NIDAYRFNDA ANALYKFLWD EFCDWGIELS KASKASVAEL GAIFKETMKL LSPFMPFISE YLYHELSRTN LESSASIMIS RYPQTKERNL EIEKIFSLVI EAIVSIRRAK ATIELGNSKI AKAYVKLNGD VNLSEASNYI ALLAKCENIE FTSSKIDGAI SDVSENLQSF IPLEGVDMSA IIMRLRSQKT KLGKEIAKLS GMLKNEKFVA NAPSEVIEAN KSGLANAQEQ LKKIDSELMK FDK
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