| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1071 |
|---|
| Symbol | |
|---|
| ID | 5407417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 967123 |
|---|
| End bp | 967761 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640872419 |
|---|
| Product | putative RhtB protein |
|---|
| Protein accession | YP_001408239 |
|---|
| Protein GI | 154174753 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGC TTATGATTTT GACCCTGGCG GTCACGCACT TTTTTGTGCT GATCGTCCCG
GGCCCAGATA TACTTCTCAT ACTTCGCACA TCGCTAGCTA GTGGTTACAA AGAGGCGATC
GCCGCTAGCC TTGGTGTGGG ATGTGGCATC GTGATATGGA TATTTCTCGC CGTTCTTGGA
CTAAACGCCC TATTTTTGGC ATTTCCAGCA ATACAAATTT TACTTATGAT CGCCAGCAGC
CTTTATCTGC TCTATCTGGG CGTGGGTATT TTGAGATCGC TAAAAAGCGG CGGTAGCCTA
AATTTAAACG GCAAAGCGAC CAAGGGCGGG CTACGGAAAT TTTTCATCAC CGGATTTTTT
ACAAATCTCT CAAACCCAAA AGCCGTACTT TATTTTGCCA GCGTGTTTTC AGTCTTTGTT
AGCTCTCTTG ACTCGCTTTG GCAGCTGCTT GGCGTGGCAT TTTTTATCAG CTTTGAAAGC
CTTTGCGTAT TTTTGCTCGT GGGTAAAATC TTCTCAGCTA AAAGGCCACG TGAGATATTT
TTAAACAATC AAAAAATTTT AGACGCCGTT TGCGGTGCGA TATTTATCGT TTTCGCACTT
CTCATCGCTT ATGAGTGTTA CCAAAAGATA CAAGGATAA
|
|---|
| Protein sequence | MNPLMILTLA VTHFFVLIVP GPDILLILRT SLASGYKEAI AASLGVGCGI VIWIFLAVLG
LNALFLAFPA IQILLMIASS LYLLYLGVGI LRSLKSGGSL NLNGKATKGG LRKFFITGFF
TNLSNPKAVL YFASVFSVFV SSLDSLWQLL GVAFFISFES LCVFLLVGKI FSAKRPREIF
LNNQKILDAV CGAIFIVFAL LIAYECYQKI QG
|
|---|
| |