Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1066 |
Symbol | |
ID | 5406665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 961041 |
End bp | 962627 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640872414 |
Product | mechanosensitive ion channel family protein |
Protein accession | YP_001408234 |
Protein GI | 154174819 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000663249 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGATCT TACTTTTTCT ACTGGGACTT TTGGCCTTTG TTTATGGCGA ACAAAATGCG AACGTGCCGC TTGATGATAT CGAAAACAGC GGCAAAGCGG TCGATATAAG GCAGCAAATA TCTGCTATTG ACACTTCGCT AAGAGGCAAC GTGTGGATAA CCAGATACGC AAACTACAAC ACCTATCAAA ATCTTTTGAG CGAGCTTGAA AAAAACGAGG CCGCCCTTAA AAAGCTAGAT AAAAATTCGC GCAAAAGCGA CGAGCTTATC AGACGTAGCG GGACATTGAA AGAGCAGATA AATTTGCTAA AAGAGTATGA GAAAGTGCCT TTTTCAAATA TGCTGGCCGC TCCCGAGGTC GAGACCCCGC CACGCATAAT AAATCCTATC GCGCTGATAT CGGGCTTTTC ATACATCAAA AAGATCAAGG GCGAAAAGGC TGATTATTCG CGTCATATCG TCGAGCTAGA GGCTCTTTTG TCAAAGCTGG AGGATAAAGA AAAGCTGATG ACGCAGCTGC TAGAATTTGA CAACAGCGAT GCAAACAAGG ACGATCTTTA CGCTCTTAGA CAAGAGATAA GCGAATTTAA CGCGGTAAAG CAAATAGCCA ACACTACTTT TAGCGTCTAT GAAAAAAGAG CCGATGAAGC CATAAATATA ACGACTACGG ATATAAAATC GCAGTTTTTA AGCATGCTAA ACATCGCTAT CGTGATCATC ATCACTATCG CTCTTACGTT TTTTGCGAAA TTTATCGCAA AGCGCACCAT CAGCGATAAT GAGCGATTTT ACACGGTCAA TAAATTTTTA AATTTCCTAA ACGTGACGAT CATCGTTTTG ATACTGCTTT TTGCCTATAT CGAAAACGTC ACTTACGTCG TGACGGTGCT TGGTTTTGCA TCGGCTGGTA TCGCTATCGC GATGAAAGAT ATGTTTATGA GCATGCTTGG CTGGATGGTG ATAATGTTTG GCGGCTCGAT CCACGTGGGA GACCGCGTCA GAGTCTTTCA CGACGGATCA GAATTTGTAG GCGATATCAT CGATATATCG CTACTCAGGA TGACGGTGTT TGAGGACGTG ACCTACTCGA CGTATAAATT CAATCGCCGC GCAGGGCGTA TCGTTTTCGT ACCGAACAAC TATATATTCA CCGATCTCAT CGCAAACTAT TCGCACTACG GTATGAAGAC CGTTTGGGAC GGCATCGATA TCGTGATAAG CTTTGATAGC AACCATAAAA AGGCCGTGCA TATCGCTAAA ACGATCGTGC GAAAGTATTC AAAGGGCTAC ACTGATATCG CAAAGCGCCA AATGACGAAG CTTCGCAGCC AATACAGCGT GAAAAATCCA AACGTCGAGC CTAGAATTTT CACATTTTTC GAGCCATACG GTATAAACAT CTCTAGCTGG TATATGTCCA ACTCATACGC CACATTAGCG CTTAGAAGCA CGATAAGTGC AGAGCTCATA GACGCGTTTA ATAAAGAAGA CGACATAAAG ATCGCATATC CTAGCCAAAC GCTCTATATT GGCAAGAAGC AGACTCCAAG CGCACATAGC GAATTTGAAG GCGAGAGTCT GGCTTGA
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Protein sequence | MRILLFLLGL LAFVYGEQNA NVPLDDIENS GKAVDIRQQI SAIDTSLRGN VWITRYANYN TYQNLLSELE KNEAALKKLD KNSRKSDELI RRSGTLKEQI NLLKEYEKVP FSNMLAAPEV ETPPRIINPI ALISGFSYIK KIKGEKADYS RHIVELEALL SKLEDKEKLM TQLLEFDNSD ANKDDLYALR QEISEFNAVK QIANTTFSVY EKRADEAINI TTTDIKSQFL SMLNIAIVII ITIALTFFAK FIAKRTISDN ERFYTVNKFL NFLNVTIIVL ILLFAYIENV TYVVTVLGFA SAGIAIAMKD MFMSMLGWMV IMFGGSIHVG DRVRVFHDGS EFVGDIIDIS LLRMTVFEDV TYSTYKFNRR AGRIVFVPNN YIFTDLIANY SHYGMKTVWD GIDIVISFDS NHKKAVHIAK TIVRKYSKGY TDIAKRQMTK LRSQYSVKNP NVEPRIFTFF EPYGINISSW YMSNSYATLA LRSTISAELI DAFNKEDDIK IAYPSQTLYI GKKQTPSAHS EFEGESLA
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