Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_1027 |
Symbol | rpsC |
ID | 5406078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1892996 |
End bp | 1893694 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640873368 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_001409148 |
Protein GI | 154174323 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000269281 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGACAAA AAGTAAATCC AATAGGTCTT AGACTAGGCA TCAACCGTAA CTGGGAGTCA CGCTGGTTCC CTACTAAAGC TAGCCTTCCT GAAAATATCG GCGAAGACTA TAAAATTCGC GCATTTTTAA AGAAAAAACT TTACTATGCG GGGATCAGTC AAATCTTGAT CGAAAGAACG GCCAAAAAGC TTCGTGTGAC CGTAGTAGCG GCTCGTCCTG GTATCATCAT CGGCAAAAAA GGCCAAGATG TCGAAAACCT AAAAAATGAC GTCAGTAAGC TGATCGGCAA AGAGGTCAAT GTAAATATAA AAGAAGAAAG AAAAGCTCAA GCTTCCGCTC AACTAGCAGC TGAAAACGTC GCTATGCAGC TTGAAAAACG TGTGGCTTTC CGCCGCGCAA TGAAAAAGGT CATCCAAGGT GCTCAAAAAT CAGGTGCCAA GGGTATCAAA ATTTCAGTTG CAGGACGTCT AGGTGGTGCC GAGATGGCCA GGACAGAGTG GTATCTAGAA GGCCGCGTGC CGCTTCATAC GCTAAGAGCG AAGATCGATT ACGGCGTTGC GGAAGCACAT ACGACTTATG GAAACATAGG TATAAAAGTG TGGATCTTTA AAGGTGAAGT CCTTCAAAAA GGTGTCCAAC CTGAAAAAAC CGAGGACGAT GCACCAAAGA AAACACGCAG ACCAAGAAGA GGTAAATAA
|
Protein sequence | MGQKVNPIGL RLGINRNWES RWFPTKASLP ENIGEDYKIR AFLKKKLYYA GISQILIERT AKKLRVTVVA ARPGIIIGKK GQDVENLKND VSKLIGKEVN VNIKEERKAQ ASAQLAAENV AMQLEKRVAF RRAMKKVIQG AQKSGAKGIK ISVAGRLGGA EMARTEWYLE GRVPLHTLRA KIDYGVAEAH TTYGNIGIKV WIFKGEVLQK GVQPEKTEDD APKKTRRPRR GK
|
| |