Gene CCV52592_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_1027 
SymbolrpsC 
ID5406078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand
Start bp1892996 
End bp1893694 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content45% 
IMG OID640873368 
Product30S ribosomal protein S3 
Protein accessionYP_001409148 
Protein GI154174323 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000269281 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAAA AAGTAAATCC AATAGGTCTT AGACTAGGCA TCAACCGTAA CTGGGAGTCA 
CGCTGGTTCC CTACTAAAGC TAGCCTTCCT GAAAATATCG GCGAAGACTA TAAAATTCGC
GCATTTTTAA AGAAAAAACT TTACTATGCG GGGATCAGTC AAATCTTGAT CGAAAGAACG
GCCAAAAAGC TTCGTGTGAC CGTAGTAGCG GCTCGTCCTG GTATCATCAT CGGCAAAAAA
GGCCAAGATG TCGAAAACCT AAAAAATGAC GTCAGTAAGC TGATCGGCAA AGAGGTCAAT
GTAAATATAA AAGAAGAAAG AAAAGCTCAA GCTTCCGCTC AACTAGCAGC TGAAAACGTC
GCTATGCAGC TTGAAAAACG TGTGGCTTTC CGCCGCGCAA TGAAAAAGGT CATCCAAGGT
GCTCAAAAAT CAGGTGCCAA GGGTATCAAA ATTTCAGTTG CAGGACGTCT AGGTGGTGCC
GAGATGGCCA GGACAGAGTG GTATCTAGAA GGCCGCGTGC CGCTTCATAC GCTAAGAGCG
AAGATCGATT ACGGCGTTGC GGAAGCACAT ACGACTTATG GAAACATAGG TATAAAAGTG
TGGATCTTTA AAGGTGAAGT CCTTCAAAAA GGTGTCCAAC CTGAAAAAAC CGAGGACGAT
GCACCAAAGA AAACACGCAG ACCAAGAAGA GGTAAATAA
 
Protein sequence
MGQKVNPIGL RLGINRNWES RWFPTKASLP ENIGEDYKIR AFLKKKLYYA GISQILIERT 
AKKLRVTVVA ARPGIIIGKK GQDVENLKND VSKLIGKEVN VNIKEERKAQ ASAQLAAENV
AMQLEKRVAF RRAMKKVIQG AQKSGAKGIK ISVAGRLGGA EMARTEWYLE GRVPLHTLRA
KIDYGVAEAH TTYGNIGIKV WIFKGEVLQK GVQPEKTEDD APKKTRRPRR GK