Gene CCV52592_1018 details

Gene Information

• Locus tag: CCV52592_1018
• Symbol: rplF
• ID: 5407582
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: -
• Start bp: 1889741
• End bp: 1890277
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640873359
• Product: 50S ribosomal protein L6
• Protein accession: YP_001409139
• Protein GI: 154175445
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000674747
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGTA TAGGAAAACA ACCTATCGCT ATCCCAAGCG GGGTGGATGT TAGCGTTGCA 
AATAGCGTCC TAAAATTTAA AAAGGGAAAC AATACAAAAG AGCTCGACAC AAAAGGGCAT 
GTCGATGTCA AGGTAGAAAA CGGTCATATA GTATTTTCGC CAAAGGGCGA TGACCGCCAA 
AGCAGGGCCT ACTGGGGAAC ATATAGGGCA CTAGCGAACA ATATAGTCAC AGGTCTTACA 
AGTGGCTTCA CCCGCCAGCT TGAGATCAAT GGCGTCGGCT ACAAAGCGGC TGCAAAAGGT 
AAAATTTTAG AGCTTACTCT AGGTTTTTCG CATCTTATAA ATTATGAGCT TCCAAGTGGC 
GTCGAGGCTA GCGTAGATAA AAACATCATA ACTATAAAAG GCGATGATAA GCAAGTAGTC 
GGTCAAGTCG CAGCTCAAGT AAGGGGCTTT AGACCGCCAG AGCCGTATAA AGGCAAGGGT 
GTTAAATATG TCGAAGAGCG CATAATCCGC AAAGCGGGCA AGACATCTAA GAAGTAA 

 

Protein sequence

MSRIGKQPIA IPSGVDVSVA NSVLKFKKGN NTKELDTKGH VDVKVENGHI VFSPKGDDRQ 
SRAYWGTYRA LANNIVTGLT SGFTRQLEIN GVGYKAAAKG KILELTLGFS HLINYELPSG 
VEASVDKNII TIKGDDKQVV GQVAAQVRGF RPPEPYKGKG VKYVEERIIR KAGKTSKK