Gene CCV52592_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_0990 
SymboldapE 
ID5407470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand+ 
Start bp504288 
End bp505385 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content48% 
IMG OID640871945 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_001407779 
Protein GI154174233 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTCG TAGCGTTTTT TACTGAAATT TTGAAATTTC GCTCCATCAC GCCTGATGAT 
GACGGATGTT TGAAATTTAT AGCGGAATTT CTCGGCGATT TCGAGGCTCG TTTTATAGAA 
AAAAACGGCG TTAAAAATTT GATATTAAGT AAAAGATTTG GCGATGGGGC GCACCTTGCC 
TTTGCGGGGC ATGTCGATGT CGTGCCACCG GGGGAGGGCT GGCAGAGCGA GCCGTTTACA 
CCCTTGATGA AAGATGGCTT CATCTACGCG CGTGGCGCAC AGGATATGAA AAGCGGCGTA 
GCGGCCTTTG TCTGCGCTTG CCGTGATGCT AAAAATTTTA ACGGCAGGCT CACTCTCATT 
TTGACTAGCG ACGAAGAGGG CGATGCGCTC TTTGGGACGT TAGAGGCGCT CAAAATTTTA 
AAAGAGCGCG GCGAGCTGCC ACAGTTTGCA GTCGTCGCCG AGCCTACGTG TACGGGAGTT 
TTTGGTGATA CGATAAAGGT CGGCAGGCGT GGCTCTATAA ACGGCAAAAT TTTGATACGA 
GGCGTGCAAG GACACGTTGC ATATCCTGAA AAATGCGTAA ATCCCGTGCA TCAAATAGCT 
CCTCTTTTAT CTAGGATCGC TGGTCATGAC ATGGACGCGG GAAGTGAGTT TTTCTCCCCC 
AGCAAGATCG TTATCACGGA TATTCGCGGC GGCATGGAGG TCTGTAATGT CACGCCAAGC 
GAGCTAGGCA TAATGTTTAA CGTGCGAAAT TCAGATATCA CGAGTGCGGA TGACGTGAAA 
AACTATCTGC AAAGCGTGCT TGAGGGGTTA AATTTCGAGC TTAGTCTAAA GCAAAGCTCG 
AAGCCTTTTT TGACCGACAA AGACAGCAAA ATCGTGCGTG CGATGAGTAA AGCGGTGCAA 
AAAATAAGCG GCGTAGCACC ACAGCTAAAC ACCAAAGGCG GCACTAGCGA CGCGAGATAT 
CTAGCCGAAT TTGGCGTGAA AGTCGTAGAA TTTGGCGTTA TAAACGACCG AATACACGCA 
GTCGATGAAA GAGCCGGCGT AAAAGAGGTC GAGCGGCTTT ATCTTGTATT TAAAGAGCTG 
ATCGAAAATT TTGCATAG
 
Protein sequence
MDVVAFFTEI LKFRSITPDD DGCLKFIAEF LGDFEARFIE KNGVKNLILS KRFGDGAHLA 
FAGHVDVVPP GEGWQSEPFT PLMKDGFIYA RGAQDMKSGV AAFVCACRDA KNFNGRLTLI 
LTSDEEGDAL FGTLEALKIL KERGELPQFA VVAEPTCTGV FGDTIKVGRR GSINGKILIR 
GVQGHVAYPE KCVNPVHQIA PLLSRIAGHD MDAGSEFFSP SKIVITDIRG GMEVCNVTPS 
ELGIMFNVRN SDITSADDVK NYLQSVLEGL NFELSLKQSS KPFLTDKDSK IVRAMSKAVQ 
KISGVAPQLN TKGGTSDARY LAEFGVKVVE FGVINDRIHA VDERAGVKEV ERLYLVFKEL 
IENFA