Gene CCV52592_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_0962 
Symbol 
ID5405870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand
Start bp555056 
End bp556384 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content46% 
IMG OID640871997 
Producttrap dicarboxylate transporter, dctm subunit 
Protein accessionYP_001407830 
Protein GI154173824 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component 
TIGRFAM ID[TIGR00786] TRAP transporter, DctM subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00805975 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTA TAGTGATGTT TTTAGCCGCG CTTTTGATGC TTGGTATAGG ATTTCCGGTC 
GCATTTACCT TTGCTGCGGT AGCGATGATA TTTGGGCTGA TCGGCGGCAT GATAGAGAGC
TTTGGTGACG GAAACGGACT GATTGGCGGG TTTATAGTTT TTAAAGATAT GTTTGCCTTC
ATGCCTTATA GGATATTTGA CTCCATCATG CAAAATAAAA TTTTGATCGC CGTGCCGCTT
TTTGTCTTTA TGGGTGTAGT TTTGCAAAAA TCAAAACTAG CCGAGAGGCT ACTTGAGAGC
ATGGGGCTAT TGTTTGGTGA AATTCGTGGC GGCATAGCTA TCAGCACCGT CTTAGTCGGT
GCGTTGCTTG CGGCATCCAC CGGTGTCGTA GGAGCTAGCG TGGTCGCTAT GGGCGTGATA
AGTCTGCCCG TGATGCTAAA ATACAAATAC AACCAGTCTC TTGGCTGCGG CACGATATGC
GCAGCGGGTA CTTTGGGGCA GATCATCCCG CCATCTATCG TGCTCATAAT CCTGGGCGAT
ATATTTTCAG TCCCGGTAGG CGAGCTTTTC CACGAGGCTT TCGTACCCGG ACTCGTGCTG
GTCGGTGCTT ACGTAGCTTA TATTTTGATA GTGTCTTACG TGAAGCCCGA ATTTGCCCCT
ATCGTAGAGT CTAGCGTAGA TGAGAGCAAG ATGAGGCAAA TTTTAAGAGC GCTTGCTGCT
ATCTTGCCGC CGCTTTTACT CGTTGTCTGC GTGCTTGGCT CGATATTTGC CGGTATCGCT
ACGCCGACTG AGAGCTCGGC CTTTGGCTGC GTTGGAGCCG TGTTACTTTC GCTTTTTTAT
AGGACGTTTT CATTTTCGAT GTTAAGAGAA GCGCTCGAGG AGAGCGTTAA AACTACGGCG
CTCGTATTTA CTATTTTAGT CGGCGCTACG GCATTTTCGC TCGTTTTTAC TTACACCGGA
GGCGATGAGA TAGTAGAAGA GTTTATGACG AATTTACCGG GTGATAAATG GGGATTTGTC
ATATTTAGTA TGGTCGTGAT ATTCGTGCTG GGATTTTTTA TAGATTTTGT GGAAATTTCA
TATATCGTCT TGCCTATTTT AGCGCCTATT GCGATCAGTC TAGGCATAAA TCCGATATAT
TTTGCCATAC TAATAGCCAT GAATCTACAG ACCTCATTCC TGACGCCGCC GTTTGGATTT
AGCCTATTTT TCTTGCGCTC GGTCGCTCCG CCGCAGATAA AGACCAGCTC GATATATAAG
GGCGTAGTGC CTTTTATAAT CGTTCAGCTG ATGGTTTTGG CATTTTTTTG TTACTTTTTG
ATGAGATAA
 
Protein sequence
MAGIVMFLAA LLMLGIGFPV AFTFAAVAMI FGLIGGMIES FGDGNGLIGG FIVFKDMFAF 
MPYRIFDSIM QNKILIAVPL FVFMGVVLQK SKLAERLLES MGLLFGEIRG GIAISTVLVG
ALLAASTGVV GASVVAMGVI SLPVMLKYKY NQSLGCGTIC AAGTLGQIIP PSIVLIILGD
IFSVPVGELF HEAFVPGLVL VGAYVAYILI VSYVKPEFAP IVESSVDESK MRQILRALAA
ILPPLLLVVC VLGSIFAGIA TPTESSAFGC VGAVLLSLFY RTFSFSMLRE ALEESVKTTA
LVFTILVGAT AFSLVFTYTG GDEIVEEFMT NLPGDKWGFV IFSMVVIFVL GFFIDFVEIS
YIVLPILAPI AISLGINPIY FAILIAMNLQ TSFLTPPFGF SLFFLRSVAP PQIKTSSIYK
GVVPFIIVQL MVLAFFCYFL MR