Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0918 |
Symbol | |
ID | 5407251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 300617 |
End bp | 301309 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640871752 |
Product | aspartate racemase |
Protein accession | YP_001407588 |
Protein GI | 154175071 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.468864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TAGGTCTTAT CGGTGGTATG AGCTACGAAT CGACGATCGC TTATTACCAG CTCATCAACA AAAAGATAAA CGAAAGGCTT GGCGGGCTAA ATAGCGGCGA AATTTTGCTA AGTAGCGTGA ATTTCGAGCA TATCGAAGAG TGCCAAAGGC TTGACAAATG GGACGAGGCG GGCGAAATTT TAGCCGCTCA CGCTAGAATT TTACAAAGAG GCGGTGCGGA CGCGATATTT ATTTGCACGA ACACCATGTA CAAGGTCTAT GACGCGGTGC AAAGCGCTGT GAGCGTGCCC GTAGTGCATA TCGCCACTGC GACACTAAAG GAGCTAAAAA GATGCGATAT AGATAAAGTG GGACTGCTTG GCACGATCTA CACGATGAGC GAGCCTTTTT ATAAAGATGA GCTAATGCGT GGCGGTGTAG AGGTCATTAC TCCTAACGCG GACGAGATGA AACTCGTAAA TGACGTCATC TTTGACGAGC TTTGCCATGG TGAAATTTCA CCCGCTTCAA AGCAAAAATT TCTCTCTATC ATTGTAAATT TAAAGGCTTG CGGCGCAAAG GGTGTAATAC TTGGTTGCAC CGAAATAGGG CTTTTGGTAG CGCAAAAGGA TACGGACGCG AGACTCTTTG ACACCACTTT GATACATATC AGCGAGGCTG TGAATTTGGC TTTGGCTCAG TAA
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Protein sequence | MKKIGLIGGM SYESTIAYYQ LINKKINERL GGLNSGEILL SSVNFEHIEE CQRLDKWDEA GEILAAHARI LQRGGADAIF ICTNTMYKVY DAVQSAVSVP VVHIATATLK ELKRCDIDKV GLLGTIYTMS EPFYKDELMR GGVEVITPNA DEMKLVNDVI FDELCHGEIS PASKQKFLSI IVNLKACGAK GVILGCTEIG LLVAQKDTDA RLFDTTLIHI SEAVNLALAQ
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