Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0900 |
Symbol | |
ID | 5406185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 279364 |
End bp | 280593 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640871736 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001407572 |
Protein GI | 154173641 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATG TAAAGGCGAG ATTTAAACAG TATCAAAATG CGATAGAAGA AAGCAATATC GTATCAAAGA CCGATGTGAA CGGCATCATC ACCTTTGTAA ACGACGAATT TTGCAAGATC AGCGGATACA ACAAAAATGA GCTCATAGGT GCGAACCACA ACATCGTTCG CCACCCCGAC GAGCCTGCAC AGAGATTTAA AGAGCTTTGG GATACGATAC TTGATAAAAA AGTCTATAAA ACCATCGCCA AAAATCTGAC TAAAGACGGG CGAGTGATCT ATCTAAACAC GACGATCATC CCGATCCTAA ATTTAAAGGG TGAGATAGAG GAATTTTTAG CGATCCGCCA CGACGTGACT AAGGTCATCG AGCTAAACGA GCAGCTTTTA AAGGCGCAAG ATGAGCTTAG AGCGCTAAAT TTAGGACTTG AAGAGCGAGT GAGAGAGCAG ACCAAAGAGC TTAGGCAGCT TAATGAAAAT TTACAAGATA TCGTAAAGAC TGAGATCGCC AAAAACGAGG AAAAGACTAA AATTTTGCTC GTTCAGTCCA GATTTGCCAG TATGGGCGAG ATGATAGCAA ATATCGCTCA TCAGTGGAGA CAGCCTCTAA ACGAGCTTGG CATCGTACTT TTTAAAATGA AAAAGCTCGT CCAAGAGGGC GGGTCGGAAT TTGAAAATTC CTACAACCGC TGTAAAAACA TCATAAAAAA TATGTCAAAC ACGATCGAGG ATTTCAGGGG ATTTTTCTCG GTAAATCAGC CAAATGAAAA TTTTGGTCTT GAAAGCGTGG TGAAAGACTC GATCTTTATG ATACAAGGCA TGCTTGAAAA AGATGGCGTG CGGCTAAATT TAGACTTTAA AGACGACGCT AAAATTTACG GCCACAAACG TCAGCTCGAG CAAGTCGTCA TAAACTTGCT AAATAACGCA AGAGACGCGC TAAACGAGCG AAACGTGAAA GATAAGCGCA TCGATATAAG AGTTTATAAG GAGGCTGGGC TCGGCGTTTT AAAAGTGCAT GATAACGGCG GCGGGATAGA GGGCGACGTG AAGGATAAAA TTTTCGAGCC TTATTTCACA ACCAAGCATG CTTCAAGAGG GACTGGCATC GGGCTATATA TGTCAAAGCT GATAATCGAT AAATTTAAAG GAGCTATAGA GGTGATGAAC GAAAACGGGG GAGCTTCATT TATACTAAAG CTTCCGTGCA AAGGAGAGGA TGATGAGTAA
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Protein sequence | MDNVKARFKQ YQNAIEESNI VSKTDVNGII TFVNDEFCKI SGYNKNELIG ANHNIVRHPD EPAQRFKELW DTILDKKVYK TIAKNLTKDG RVIYLNTTII PILNLKGEIE EFLAIRHDVT KVIELNEQLL KAQDELRALN LGLEERVREQ TKELRQLNEN LQDIVKTEIA KNEEKTKILL VQSRFASMGE MIANIAHQWR QPLNELGIVL FKMKKLVQEG GSEFENSYNR CKNIIKNMSN TIEDFRGFFS VNQPNENFGL ESVVKDSIFM IQGMLEKDGV RLNLDFKDDA KIYGHKRQLE QVVINLLNNA RDALNERNVK DKRIDIRVYK EAGLGVLKVH DNGGGIEGDV KDKIFEPYFT TKHASRGTGI GLYMSKLIID KFKGAIEVMN ENGGASFILK LPCKGEDDE
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