Gene CCV52592_0880 details

Gene Information

• Locus tag: CCV52592_0880
• ID: 5407659
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: +
• Start bp: 261697
• End bp: 262371
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640871717
• Product: outer membrane lipoprotein
• Protein accession: YP_001407553
• Protein GI: 154173936
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1462] Uncharacterized protein involved in formation of curli polymers

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTTAA AAAATGGATT AAAACTGGCT CTTGCAGGCT GCTTTATAGC ATTATTGGCT 
GGCTGCGCGA CGGAGTCCTC TAGGACTATC GAAGCCCCGA AAGTAGCCTC TTTTGGCACG 
CCGTATAACG GCACGAAAGT CGCAGTCTCG ATCGGACGCT TCAACAACCA GTCCTCCTAT 
CAAAACGGCA TATTTTCAGA CGGCGAGGAT CGTCTGGGCA ACCAAGCTCA AAGCATCTTA 
ATGACTGACT TGCAGCAAAG CGGGCGCTTT TCAGTGCTTG ATCGCACGAA TATGAAAGCC 
ATCAAAGAGG AGAGCGCCAT CAACAAAAAA GCGCAAAATC TAAAGGGCGC AAAATACGTC 
ATCACGGGCG ATGTGACAGA ATTTGGCAGG AAAACGACGG GCGATCATCA GCTCTTTGGC 
ATCCTTGGCA AGGGCAAGAC CCAAACCGCC TACGCGAAGG TAAATTTAAA CGTAGTCGCG 
GTCGATGACT CCGAGGTCGT ATTTTCAGTG CAAGGAGCGG GCGAATACGA GCTCTCAAAC 
AGAGAGATCA TCGGCTTTGG CGGCACTGCA GGCTACGACT CGACGCTAAA TGGCAAGGTG 
CTTGGCCTGG CTATAAGAGA AGCCGTGAAT AACCTCGTAA ACGGACTTGA AAGCGGCGCA 
TGGCAGGCAA AATAG 

 

Protein sequence

MILKNGLKLA LAGCFIALLA GCATESSRTI EAPKVASFGT PYNGTKVAVS IGRFNNQSSY 
QNGIFSDGED RLGNQAQSIL MTDLQQSGRF SVLDRTNMKA IKEESAINKK AQNLKGAKYV 
ITGDVTEFGR KTTGDHQLFG ILGKGKTQTA YAKVNLNVVA VDDSEVVFSV QGAGEYELSN 
REIIGFGGTA GYDSTLNGKV LGLAIREAVN NLVNGLESGA WQAK