Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0817 |
Symbol | |
ID | 5406216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 200509 |
End bp | 201729 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640871656 |
Product | FAD-dependent oxidoreductase |
Protein accession | YP_001407492 |
Protein GI | 154173817 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000422282 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAAGG TCGTTGTTAT CGGTGCTGGT GTCAGCGGGC TGATGAGCGC TTACGAGCTG GCAAAAAACG GCGAAGACGT CTTAGTGATC GAGCGAGGAG ACGGCGATTA CGATATGAGC GGGATATTAA GTGCGTTCAA GACGCCTCCT TTAGCTCATG ATGGCGTCAT ATCAGGCTCA TTAAAGCGCC TCTTTGTGGG CACTAGCGAG CTTAGTATCA GTCCCAGCCT AAATGAAAAT TTCCGCAGCT GGATGACGAA ATTTAGCCTT AGTATAAACG ACGAGCGCAT AAAAAAATCA CAAATTTTAT TTGAAAAATT TGGCGGCGAA AGCTATGAAA TTTACGCCCG GCTAAACGAA AAATACTCTC AGATAGATTT CAAACGAAAC GGTCAATTTT TAGTCTTTAC CGATGAAAAT AGCTTTAAAA AACGCCTGGA TAGCATCAAG ATAGGCGATC AAACGCAAGA AATTTTAGAC GTTGAGGGCG TGAAAAACGA ACTTGGATTT TTAAACCAAA ACATAAAAGG CGTCATAGAT CTAAAGCAAA ACGCCCAAAT AGACGTGCAA AATTTGGCTG ACGCTCTAAA AAGAGAGCTC GAAAATTTAG GCGCAAACAT CGTTAAGGAC GAGATCACTT CGTGGGAATT TAGCGGCAGT CTCATCGCTA AAGCCATCGG CAAAGAAAAT GCCTACGAAG CCGATACTTT CTTACTGGCC TCCGGCATAG ACACCGATCT GGCAAGCCGT CTGGGCTCGA AGCTAAATTT GATCCCGTCT AAATTTTACA GCGTCGATCT GAAATTTAGC GCAGAAAAGA TCCCCTCAAA GCCGGTCGTT TTAAACGATC TGTTCGCCAA AATAACGCCT AAAACGGACG GTGTCAAGAT CACATCGGGC TTGCAAATAG GCAACATCGA CACTCTCGTT CGCATGGATA AGATAAATGA ATTTCTAAAC GCGCTAAAGC CCTTTGGCAC GACATGCGAG CTAAAAGAGC CAAGATACAG GGTAAATTTC ATCGCGCTGA CGCCAAACGA CATGCCTTTG ATCGGGCGCG ACGAGGTCTA TAAAAACTTA GTCTTTAGCA TGGGGCACGG CTGGCTCGGG CTTAGCTTCG CACCGGCTAG CGCTCGCCTC GTGGCGCGCC TCATAAGCGA GGATAAAGAA AACATCGACA TCAACGAGCT GCTACTTTTT AGCGGATTTT ATCAGGGCTA A
|
Protein sequence | MSKVVVIGAG VSGLMSAYEL AKNGEDVLVI ERGDGDYDMS GILSAFKTPP LAHDGVISGS LKRLFVGTSE LSISPSLNEN FRSWMTKFSL SINDERIKKS QILFEKFGGE SYEIYARLNE KYSQIDFKRN GQFLVFTDEN SFKKRLDSIK IGDQTQEILD VEGVKNELGF LNQNIKGVID LKQNAQIDVQ NLADALKREL ENLGANIVKD EITSWEFSGS LIAKAIGKEN AYEADTFLLA SGIDTDLASR LGSKLNLIPS KFYSVDLKFS AEKIPSKPVV LNDLFAKITP KTDGVKITSG LQIGNIDTLV RMDKINEFLN ALKPFGTTCE LKEPRYRVNF IALTPNDMPL IGRDEVYKNL VFSMGHGWLG LSFAPASARL VARLISEDKE NIDINELLLF SGFYQG
|
| |