| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0816 |
|---|
| Symbol | miaA |
|---|
| ID | 5406957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | - |
|---|
| Start bp | 199616 |
|---|
| End bp | 200506 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640871655 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_001407491 |
|---|
| Protein GI | 154174124 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000211793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTTGCG AATTTGCCAT CATCGGCACC ACCGCAAGCG GTAAAAGCGC GCTCGCACTG
CAAATCGCGC AAGAATTTAG CGGCGTTATC TTAAGCCTTG ACAGCCTGGC GCTCTACAAG
CAAATCGATA TCGCAAGTGC GAAGCCAAGC CGCAAAGAGC TAGCTAGCGT GAAGCATTTT
GGCGTAGATG AGATCTATCC AAACGAAAAT TTCAGCGTCG GCATGTTTTT TAAAATTTAC
GAGCGCGCCA AAGACTACGC TCTAAACGCG GACTGTCCGC TCATCATCAC CGGCGGCAGC
GGCTTTTATC TAAGATCGAT GCTAAGCGGC CTAGCTCCTG ACGTACCAAA ATGCGACAAG
GCTTTAAGTA ACGATGAAAT TTACGCGTTG GCAGCTAGGA TCGATCCCGA ATTTTGCGCT
AAATTTAGCC CCAACGACAG CTACCGCCTC GAAAAATGGT ATCAAATCTA CAAATTTAGC
GGCGCAGTGC CCAGCACCTG GCTAAGAGAA AATACGAGCG AACCCGTGAT AAAAGAGCTC
GCGATATTTG AAATTTTATG GTCGGCGCAG GCGATAAGAG AGCGCATACA AAGGCGCACG
CAGGCGATGT TTGAGGCGGG ACTGCTAGAG GAGGCGAAAT TTCTATTTGA CACCTACGGA
CGCGAGCTAA AGCCGCTAAG ATCGATCGGG CTAAAGGAGT GCGCAGATTT TTTTGACGCC
AAGATATCGC GCGAGGAGCT AGCCTCGCTC ATCTGCACGC ACACGGCCCA GCTCGCCAAG
CGCCAACGCA CCTTCAACCG CTCGCAATTT AGCAAAATTT TTATCGGCGA GCCGGACGCC
GCGAGAGAGA AGATCAAGGG ATTTTTAAAA AACCAAGCAA AGCGCCCATA A
|
|---|
| Protein sequence | MFCEFAIIGT TASGKSALAL QIAQEFSGVI LSLDSLALYK QIDIASAKPS RKELASVKHF
GVDEIYPNEN FSVGMFFKIY ERAKDYALNA DCPLIITGGS GFYLRSMLSG LAPDVPKCDK
ALSNDEIYAL AARIDPEFCA KFSPNDSYRL EKWYQIYKFS GAVPSTWLRE NTSEPVIKEL
AIFEILWSAQ AIRERIQRRT QAMFEAGLLE EAKFLFDTYG RELKPLRSIG LKECADFFDA
KISREELASL ICTHTAQLAK RQRTFNRSQF SKIFIGEPDA AREKIKGFLK NQAKRP
|
|---|
| |