| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0714 |
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| Symbol | mfd |
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| ID | 5406024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | - |
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| Start bp | 1258637 |
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| End bp | 1261582 |
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| Gene Length | 2946 bp |
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| Protein Length | 981 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640872702 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001408519 |
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| Protein GI | 154175141 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.721642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCAA GGGTCTATGA ATATCTTTTA AAAAATGACG CTCAAATTTT GATCTGCGAG
GACGACAAAG AGGCGAGCCT ATGCGCCGAT GCGGCGGAAT TTGCCGGCTT TAAAGCCTTT
AGGCTGCCTG ATTTTAGAGC GCATTTTGGC GACGACCTGC GAAGCTTCAG CGAGGAGCTT
TTTGAAATTT CAAGCGTGCT TAGCGCTTAT TATAAATTTA ACGGCAAAAA GCTCATCATC
AGCCCCTTTC ACACTCTGCT AAACCGCCTG CCAAAGGCAA AACACCTACA AAGCAGGACG
ATAAATTTCG GCCAAAAGCT AAATTTAAAC GAGCTTGCAG ACGAGCTCAT GCGCTTTGGC
TACGATGTCG TTGATATCGT CGAAGGTGCG GGAGAATTTA GCCTTAGAGG CGAGATCATC
GACATTTACG GCGTAAATAT GAACGAGCCG GTCAGGATTT TGCTCTTTGA CGATGAGGTC
GAGAGTATCA GAAACTACTC CACCGCCACG CAAATAAGCT CGAAAACGGA GCTAGAAAGC
GTCGAAATAA CGCCATTTAT AGCAAATTTA AGTAAGGCTG AGTTTGAAGA CGTGAGCCAA
AAGATAGAGC GGATGCAAAC GGACGCTTTG GTGAACGATC TAAATTCTCT GGGCTTTTGG
GCGATAGATG ACTTTGGTGA TTATCTAGCC GAATTTGAGT GCAAACTCGT TAAAAAGATC
GATCTTAGCG AGCTTGCAGA CGATGCAAAG AGGCTTGAAA AATTTGAAAT TTTGCCCGAG
GCCAAAGTCT ATAAAGACCT GGTCGTTACG TTAAACGATG ATTTTTTTGA GCTCAATCAA
AACAAAAAGA TCAGCGTCCT GGCGCGCAAC GAAAGCCTCT TTAGCCAGTT TGATCTAAGG
CGCTTTAAAA ACGTGCAGTT CGTGCAAAGC CCGCTCGTTT TAAATTTAAC CTCGAACGAG
CAGATCATCG TTTCGCTCAA TAAATTTGAG AAAAAAAGAC GTGTAAAGCG TGCCAGCCTC
GTAGTGGACG AGCTAAAGAT AAACGACTAC GTGGTGCACG AGGACTACGG CATAGGTAGG
TTTTTAGGGC TTGAAAAGAT AACCGTTTTG GGTGCGACGA AAGAATTCGT CGTGATCGCT
TATCAAAACG ACGATAAGCT GCTGCTGCCG GTAGAGCATC TAAACCTGAT CGATCGCTAC
ATCGCGCAAA ACGGCTCTGT CGCGGTGCTA GATCGTCTGG GTAAGGCAAG CTTTGCAAAG
ATAAAAGAGA AGGTGCGCGA GAAACTTTTC GTCATCGCTT CAAAGATCGT CGCCATGGCC
GCGAAGCGCG AGCTCATAGC CGGCAAAGTG ATAGAAAAAA ACGATCTTGA ATATCTAAAA
TTCGTGCAAA ACGCAGGGTT TGACTACACT ACCGATCAGC AAAAAGCGGT CGAGGAGATA
ATGAGCGATC TAAAAAGCAC GCGAGTCATG GATAGGCTTT TAAGCGGGGA TGTTGGCTTT
GGAAAGACGG AAGTCGCGAT GAACGCGATA TTTGCCTGCG TCAAATCAGG CTTTAGCGCA
CTCTTTTTCG TGCCGACCAC GCTTCTTAGC GCGCAGCATT ATAAGAGCCT AAAGGAGCGG
TTCGCGGACT TTGGCGTCAA AATTTTCAGG CTCGATAGAT TTACATCCGC TAAGGAAAAA
TCGGCGATGC TAAAGGTGCT AAAAGACAAC GAGCCTTGCG TGTGCGTCGG TACTCACGCG
CTTTTAGGCG TAAAGGCGAA CAACGTCGGT CTCATCGTCA TCGATGAGGA GCATAAATTT
GGCGTCAAAC AAAAAGAGCA GCTAAAAGAG GTCTCGGCAA ATTCTCATAT CCTGAGCATG
AGCGCCACAC CGATCCCTAG GAGCCTGAAT ATGGCGCTTA GTAAGATAAA AAGCTACTCG
GTATTAGCCA CCGCGCCAAG CTCGAGGCTC GATGTGCGAA CGAGCGTGAG AGAGTGGGAC
GAGAAGGTCG TCAAAGAGGC GCTCATGCGT GAGATGAGAC GCGGCGGTCA GGCATTTTAT
ATCCACAACC ATATCGCAGA CATAGAGCAG ACCGCGCAAA ATTTACGTAA AATTTTACCT
AAAATCCGCA TCCTGGTGCT TCACTCCAAG ATAAACGCCA AAACCACCGA AGATGAGATG
ATGAAATTTG AGCGTGGCGA ATACGACGTG CTGCTTTGCA CGAGCATAGT AGAAAGCGGC
ATCCACCTGC CAAACGCAAA CACCATCATC ATCGAAAATG CAAATAAATT TGGCATGGCT
GACTTGCATC AGCTGCGCGG ACGCGTCGGC AGGAGCGATA AGCAGGCGTA TTGTTATTTT
TTAGTCGAGG ACAAGGACGC GCTGGGAGGC GACGCGCTGA AGCGTCTATT GGCGCTTGAG
AGCAACTCGT TTTTGGGCTC TGGCTCACTA CTAGCCTATC ATGACCTTGA GATCAGAGGC
GGCGGAAATA TCGTCGGTGA GGCGCAGAGC GGACACATCG AGGCTATCGG CTACTCGCTT
TATCTAAAGA TGCTTGAAGA CGAGATAAAC AAGCTTTTAA ACAACGACAG CGCAAAGCTT
GACAAGATCG ATCTAAAGCT AAGCATAAAC GCCTTTTTAA ACCAAGACTT CATCCGCGAG
GATCGCCTCA GGCTTGAAAT TTATAGGCGT CTTAGCAAAT ACGAGAGCGT GAGCGCGGTC
TACGAGATAG CAAGCGAGCT TGAGGATAGA TTTGGCAAGA TGGACGTTTA TACAAAGCAG
TTTTTAGACC TCATAGCGAT CAAAATTTTA GCTCTAAAAT GCGGCTACAA GGCGATCTCA
AACAGCGAGC AAAATATCGT TTTGACGCGC AAAAACGATG AAAAAGTGCG CCTAAGATCT
CGCAGCAAAG ACGATGACGA CGTGATAGAT GAAATTTTGA TCCATTTAAG GAAGGAGGCC
AAATGA
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| Protein sequence | MQARVYEYLL KNDAQILICE DDKEASLCAD AAEFAGFKAF RLPDFRAHFG DDLRSFSEEL
FEISSVLSAY YKFNGKKLII SPFHTLLNRL PKAKHLQSRT INFGQKLNLN ELADELMRFG
YDVVDIVEGA GEFSLRGEII DIYGVNMNEP VRILLFDDEV ESIRNYSTAT QISSKTELES
VEITPFIANL SKAEFEDVSQ KIERMQTDAL VNDLNSLGFW AIDDFGDYLA EFECKLVKKI
DLSELADDAK RLEKFEILPE AKVYKDLVVT LNDDFFELNQ NKKISVLARN ESLFSQFDLR
RFKNVQFVQS PLVLNLTSNE QIIVSLNKFE KKRRVKRASL VVDELKINDY VVHEDYGIGR
FLGLEKITVL GATKEFVVIA YQNDDKLLLP VEHLNLIDRY IAQNGSVAVL DRLGKASFAK
IKEKVREKLF VIASKIVAMA AKRELIAGKV IEKNDLEYLK FVQNAGFDYT TDQQKAVEEI
MSDLKSTRVM DRLLSGDVGF GKTEVAMNAI FACVKSGFSA LFFVPTTLLS AQHYKSLKER
FADFGVKIFR LDRFTSAKEK SAMLKVLKDN EPCVCVGTHA LLGVKANNVG LIVIDEEHKF
GVKQKEQLKE VSANSHILSM SATPIPRSLN MALSKIKSYS VLATAPSSRL DVRTSVREWD
EKVVKEALMR EMRRGGQAFY IHNHIADIEQ TAQNLRKILP KIRILVLHSK INAKTTEDEM
MKFERGEYDV LLCTSIVESG IHLPNANTII IENANKFGMA DLHQLRGRVG RSDKQAYCYF
LVEDKDALGG DALKRLLALE SNSFLGSGSL LAYHDLEIRG GGNIVGEAQS GHIEAIGYSL
YLKMLEDEIN KLLNNDSAKL DKIDLKLSIN AFLNQDFIRE DRLRLEIYRR LSKYESVSAV
YEIASELEDR FGKMDVYTKQ FLDLIAIKIL ALKCGYKAIS NSEQNIVLTR KNDEKVRLRS
RSKDDDDVID EILIHLRKEA K
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