| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0707 |
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| Symbol | secD |
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| ID | 5407217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | - |
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| Start bp | 1268654 |
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| End bp | 1270219 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640872709 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001408526 |
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| Protein GI | 154174145 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.907979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTTATA GGCTGATCAT ACTTTTGATC GCCTTAATTT TTGGCTTTGG CTTTTCGATG
CCATCTTTTT TGCAAACTCA AAGCGGAGCT AAAATTTCGC TTGGTCTTGA CTTGCAAGGC
GGTCTTCATA TGCTCCTTGG CGTAGAGACC GACAAAGCGA TCCACTCCAA GATCAAATCA
ATCGCCGGCA GCATCAACTA CTACGCAAAA AAAGAAGATG TGCTCATCGA TAAATTTAAA
ATAAAAGAAG ATAGCGTGGA ATTTGCGCTC CTTGACAATG ATGAGGTATC TAAAGTAGAT
GCAGCCCTAA AAGAGATAAA TGGTATCAAC GTCGAAAAAA ACGGACTTTC TTACACGATC
ACTCTAACGG ATAAAGAGCG TGTCGATACG ATAGAATACG CCATATCTCA AGCCGTAGAG
ACCATACGAA ATAGGCTCGA TCAGTTTGGC CTCGCAGAGC CGACCGTCGC TAGGCAGGGC
AAAGACAACA TCCTAGTCGA GCTTCCAGGT ATCAAAACGG CTGATGATGA GCAGCGCGCA
CGTGACCTCA TCGCAAAAGC CGCGCACCTT CAGCTAATGG CTGTCGATGA CAAGAGGCAG
GATCAAGCTA GGACTATGAG CCCTACCGAG GCCGAGAGCT ACGGCGATGT CATATATCCA
GATGCAAAAG ATGATCGCAT AAAATACGTT CTCAAAAATA TCCCCGTACT AGACGGAGCG
ATGCTTACAG ATGCGAAGGT CGCGTTTTCT CAGCAAAATA ATCTGCCTAT CATAAATTTC
ACTCTAAATT CCGAAGGCGC TAGGATATTT GGCGATTTTA CCGGGGCAAA TGTCGGCAAG
CGCTTAGCTA TCGTGCTTGA CGGTAAGGTA TATTCGGCCC CTGTGATAAA CGAGCGAATA
GGCGGTGGTA GCGGTCAGAT AAGCGGTGGT TTCACACTTG ATGAGGCTCA CGACGTAGCG
ATCGCGCTTA GAAGCGGTGC GCTATTAGCC CCTGTAAAGA TGCTGGAAAA ACGCAGTATC
GGTCCGTCTT TGGGACAAGA GAGCATAAAT CAAAGCATGA TGGCGCTAGC GGCAGGATCG
ATAGCAGTCG TGCTTTTCAT GCTTGTTTAT TATGGAATTT CAGGCGTTTT TGCAAACATT
GCTTTGATCG CTGACGTCGT GATACTTGTC GCTGTGATGG CGCTTTTTGG TGCGACGCTC
ACACTGCCTG GAATGGCCGG TATAGTGCTT ACCATCGGTA TGGCGGTGGA TGCTAACGTC
ATCATAAACG AGCGTATCAG GGAGCTGCTG CGCGATGGGG TCAGCATCAA AACGGCCGTG
CAAAAGGGCT ACGAGCATGC GATGAGCGCG ATCATAGATG CGAATTTGAC GACTATCATA
ACCGTCGCCG TTCTTTACGC TTACGGCACT GGGCCGGTAA AGGGCTTTGC CGTCACGATG
AGTATCGGTA TCATCGCTTC GATGATCACG GCGATACTGG GTACTCACGG TATGTTTGAC
GCGTTCATGG AAAAGATCGA AAAAAGCGGA AACACAAGCC TTTGGTTTGG TTATAAAAGG
AGCTAG
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| Protein sequence | MTYRLIILLI ALIFGFGFSM PSFLQTQSGA KISLGLDLQG GLHMLLGVET DKAIHSKIKS
IAGSINYYAK KEDVLIDKFK IKEDSVEFAL LDNDEVSKVD AALKEINGIN VEKNGLSYTI
TLTDKERVDT IEYAISQAVE TIRNRLDQFG LAEPTVARQG KDNILVELPG IKTADDEQRA
RDLIAKAAHL QLMAVDDKRQ DQARTMSPTE AESYGDVIYP DAKDDRIKYV LKNIPVLDGA
MLTDAKVAFS QQNNLPIINF TLNSEGARIF GDFTGANVGK RLAIVLDGKV YSAPVINERI
GGGSGQISGG FTLDEAHDVA IALRSGALLA PVKMLEKRSI GPSLGQESIN QSMMALAAGS
IAVVLFMLVY YGISGVFANI ALIADVVILV AVMALFGATL TLPGMAGIVL TIGMAVDANV
IINERIRELL RDGVSIKTAV QKGYEHAMSA IIDANLTTII TVAVLYAYGT GPVKGFAVTM
SIGIIASMIT AILGTHGMFD AFMEKIEKSG NTSLWFGYKR S
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