Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0571 |
Symbol | topA |
ID | 5407826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 1729008 |
End bp | 1731116 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640873184 |
Product | DNA topoisomerase I |
Protein accession | YP_001408974 |
Protein GI | 154175095 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATC TAATCATTGT AGAGTCGCCT GCAAAAGCAC GAACTATCAA GAATTTCCTA AGCAAAAACT ACGATGTCAT CGCATCTAAA GGGCACATAA GAGACCTGCC TAAAACCAGC TTTGGCATAA AGATCGAGGA TGATAAATTC ACGCCAGAAT ACCGCGTGAG CCTGGATCAT TCAAAGATAG TAAAAGAGAT AAAAGAGCTA GCCAAGGGTG CAAACGAAAT TTACCTCGCG ACCGATGAGG ATAGAGAGGG AGAGGCGATA GCGTTTCACA TCGCAAACGC CATCGGTAAA GAGGTCTCCG CGCTGCCTCG CATAGTCTTT CACGAGATAA CAAAGACCGC CATCGACAAT GCCTTAAAAC ATCCGCGAAA GATCGATATG AACAGCGTAA ATGCGCAGCA AGCGCGTAGA TTGCTCGATC GTATCGTAGG CTACAAGCTA AGCCCTCTTT TAAATTTAAA GATACAAAAG GGCCTAAGCG CAGGACGCGT GCAAAGCGCC GCACTAAAGA TCATCGTCGA TCGTGAGCGC GAGATCATAG CGTTTAAGCC GGTCGAGTAT TACAGTATCG ATACGAAATT TAAAACCGAT CTTGACGCCG AGCTGGTAAA ATTTGAAGGC AAAAAGATAG AAAAGCTCAC TATTACAAAC GCCGATCGCG CCAGATACAT CGTAGATGCC CTAAAAAACG AGAAATTCAG CGTCCGCGAG ATAGAGAGCA AGGATAGAAA GATCCAGCCA AGCCCGCCCT TCATGACCTC TACGCTTCAG CAAAGCGCCT CAAACCGCCT GGGCTTTAGC CCTAAAAAGA CGATGATGCT GGCTCAAACG CTTTATGAGG GCGTGCAGAC GCACGAGGGC TTCATGGGCG CGATAACATA TATGAGGACG GACAGCCTAA ATTTAGCCAA AGAGGCGGTC GAGGCCGCAC GCGAGCTGAT AAAAAACGAG TTTGGCAAAG ACTATCTACC GCCAAAAGCC GTGCACTACG CGACCAGCTC AAAGGGCGCG CAAGAGGCGC ACGAAGCCAT ACGCCCGACA AATCTAAATT TCACGCCCGA GATCGCGGCG AAATTTTTAC AAAAAGATGA GCTGCGCCTT TATACTTTGA TATACAATAG ATTTTTAGCA TGTCAGATGA GCGCGTGCGT GAGCCAAACG CAAAATTTAT TCGTCGTAAG CGATAATGGC GAGTTTAAGA TAAGCGGCAG AAAGGTGCTA TTTGACGGCT TTTACCGCGT TTATGGCGAT ATGGATAAGG ATAAAATTTT ACCAAATCTA AACGTAGGCG ATGAGATGAA GCTTGAAAGC ATCAAAGAAA GCCAGCATTT CACCGAGCCG CCTGCTCGCT ACTCGGAGGC CGGACTTGTC AAAAAGCTAG AAAGCCTTGG CATAGGACGT CCTAGCACCT ACGCCCCTAC GATCTCACTA CTGACCTCTC GCGAATACGT CAGGGTCGAG AAAAAGCAGC TCATACCAAA CGACGTCGCC TTTAGCATGA TAGGCGTTTT GGAGGAGCAT TTTAATGATA TCGTAGATAG CGAATTTACC TCGCATCTTG AAGAGAAGCT CGACCTCATC GCCGAGGACA AGGCCGACTG GCAAAAGGTA CTGAGCGAAT TTTACTATCC TTTCATGGAT AAAATTTCAG AAGGCAAAAC GGGCATCAAA AGCCTCAAAG TCGCCACTCC GATCGGTGAG AAATGCCCGC AGTGTGGCGG CGAGCTGGTA AAAAGAAAGG GTAGATACGG CGAATTCATC GCATGTAGCA ATTTCCCGAA GTGTAAATAC TCACGCAACA TCGCAAGCCA AGCAAACGAC GCAGGCGCGC AAACGACCGA GCCAAAAGCA AAAAAAGAGC TGGTAAAGCT GGACGTACCA TGTCCAAAAT GCGGCGGCGT CATCGTGGAA AGGTTTAGCA GACGCGGGAA ATTTTACGGA TGTGCCAACT ATCCAAAGTG CGACTTTATC AGCAACTACG AGCCTACCGA GCATAAATGT AGCGAATGCG GGTCGATGAT GGTAAAAAAA GAGCTCAAAA AAGGGACGTT TTTAGAGTGC ACGAAGTGCA AGCACAAAGT CCAGATAGGC GAGAACTAA
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Protein sequence | MKDLIIVESP AKARTIKNFL SKNYDVIASK GHIRDLPKTS FGIKIEDDKF TPEYRVSLDH SKIVKEIKEL AKGANEIYLA TDEDREGEAI AFHIANAIGK EVSALPRIVF HEITKTAIDN ALKHPRKIDM NSVNAQQARR LLDRIVGYKL SPLLNLKIQK GLSAGRVQSA ALKIIVDRER EIIAFKPVEY YSIDTKFKTD LDAELVKFEG KKIEKLTITN ADRARYIVDA LKNEKFSVRE IESKDRKIQP SPPFMTSTLQ QSASNRLGFS PKKTMMLAQT LYEGVQTHEG FMGAITYMRT DSLNLAKEAV EAARELIKNE FGKDYLPPKA VHYATSSKGA QEAHEAIRPT NLNFTPEIAA KFLQKDELRL YTLIYNRFLA CQMSACVSQT QNLFVVSDNG EFKISGRKVL FDGFYRVYGD MDKDKILPNL NVGDEMKLES IKESQHFTEP PARYSEAGLV KKLESLGIGR PSTYAPTISL LTSREYVRVE KKQLIPNDVA FSMIGVLEEH FNDIVDSEFT SHLEEKLDLI AEDKADWQKV LSEFYYPFMD KISEGKTGIK SLKVATPIGE KCPQCGGELV KRKGRYGEFI ACSNFPKCKY SRNIASQAND AGAQTTEPKA KKELVKLDVP CPKCGGVIVE RFSRRGKFYG CANYPKCDFI SNYEPTEHKC SECGSMMVKK ELKKGTFLEC TKCKHKVQIG EN
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