| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0565 |
|---|
| Symbol | |
|---|
| ID | 5407636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 1723505 |
|---|
| End bp | 1724533 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640873178 |
|---|
| Product | spore coat polysaccharide biosynthesis protein SpsE |
|---|
| Protein accession | YP_001408968 |
|---|
| Protein GI | 154173860 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2089] Sialic acid synthase |
|---|
| TIGRFAM ID | [TIGR03586] pseudaminic acid synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT CAAATTTCGA CACCGCAAAA AAGGTCTTCA TCATAGCCGA GCTCTCGGCA
AACCATAGCG GCAGCCTGCA AACCGCGCTT GCGACGATAA AGGCAGCGGC GCGGGCGGGC
GCAGACGCGA TAAAACTGCA AACTTATACG CCAGATAGCC TCACGCTAAA CTGCGCAAAA
GAGGATTTTA TGGTGCATGG CGGGCTTTGG GACGGGCGAA ATTTATATGA GCTCTACGCG
GAGGCTCTCA CGCCCTACGA GTGGCACGAG CAGCTTTTCG AGGCGGCGCG CTCAGAGGGG
CTTATCTGCT TTTCTAGCCC ATTTTGCGCG GCGGATGCGG ACTTTTTAGA GCGGTTTGAC
CCGCCAGCCT ACAAGATAGC AAGCTTTGAG GCAAACGATC CAAATTTCAT CGCACACGTG
GCTAAAAAGG GTAAGCCGGT CATCATCTCA ACGGGCATAG CAACACTTGA AGAGATCGAG
CGAGCGGTCA AAATTTGCCG TGAAAATGGC AACGATCAGA TCGCGCTTTT AAAATGCACG
TCAAGCTACC CCGCTCCGCT AAACGAGATG AATTTACGCA CGATCGCGGA TATGCGGGAG
CGATTTGGCG TGGAGGCGGG CTTTTCGGAC CATACGCTTG GCTCACTCGC TCCTGTCGTC
GCCGTGAGTC TTGGCGCGCG TATCGTGGAG AAGCACTTTA TCCTCGATAA AAGCGTGCGA
AGCGTCGATG AAGCGTTTAG TCTTGACGAG GCGGAATTCG CTCAAATGGT AAAAGCGGTG
CGCGACGCGG AGGCGCTTTT GGGCGAGACG AGCTACGAGC TTAGCGAAAA ATCGATAAAA
AATAGAAATT TCGCTCGCTC GCTTTATGCT AGTGCGGACA TAAAAAAAGG TGAAATTTTT
AGCGAAAATA ACGTAAAATC AGTACGCCCG GGCTTTGGGC TGGAACCAAA ATTTATGCCC
CGGCTACTTG GCAAAACGGC AAAACGAGAT ATCGAATTTG GCGAACGGAT AACGAAAAAG
GATCTATAA
|
|---|
| Protein sequence | MKISNFDTAK KVFIIAELSA NHSGSLQTAL ATIKAAARAG ADAIKLQTYT PDSLTLNCAK
EDFMVHGGLW DGRNLYELYA EALTPYEWHE QLFEAARSEG LICFSSPFCA ADADFLERFD
PPAYKIASFE ANDPNFIAHV AKKGKPVIIS TGIATLEEIE RAVKICRENG NDQIALLKCT
SSYPAPLNEM NLRTIADMRE RFGVEAGFSD HTLGSLAPVV AVSLGARIVE KHFILDKSVR
SVDEAFSLDE AEFAQMVKAV RDAEALLGET SYELSEKSIK NRNFARSLYA SADIKKGEIF
SENNVKSVRP GFGLEPKFMP RLLGKTAKRD IEFGERITKK DL
|
|---|
| |