Gene CCV52592_0546 details

Gene Information

• Locus tag: CCV52592_0546
• Symbol: upp
• ID: 5407430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: -
• Start bp: 1707610
• End bp: 1708236
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640873161
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_001408951
• Protein GI: 154173742
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0666714
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACG TCAGGCTCAT CTCGCACCCC TTGATCGAAC ACAAACTCGC CATTTTAAGG 
GATAAAAACA CGCAGCCGTT TCAGTTTCGT ATGCTCGTTG ACGAGATAAG CCACCTGATG 
ATCTTCGAGG CCACGCGGGA TCTAAATCTG CGCGAGATCA GTGTGCAGAC CCCCGTGGCT 
ACGACGAAGG CGCGAAAGCT CGCGACCAAG GTCATGATCT GCCCGATCCT GCGCGCCGCG 
CTTGGGATGC TCGATAGCGT TTTTACGATC ATCCCCGATG CGAGTGTCGG GTTTCTTGGC 
TTTCAGCGCA ATGAAAAAAC CGCGCAGGCG GAGTTTTTCT ACGCAAAGCT GCCAAAGGAC 
GCTAAAAGCC GCCTTGCCAT CATCATCGAT CCAATGTTTG CCACCGGCGG CACGGCGATA 
GACGCGGTCA AATTTTTACG CGAAAACAGT GTCAAGCAGA TCAAATTTAT CTCCATCATC 
GCCGCTCCCG AGGGGCTTAG GCGTTTTAGC GAAATTTACC CTGACGTCGA GGTCTATACC 
GCTGCGATCG ACGAGCGACT AAACGAGAAA AACTATATCG TGCCGGGACT TGGCGACGCA 
GGCGATAGAG TGTTTAATAC GCTGTAA 

 

Protein sequence

MKNVRLISHP LIEHKLAILR DKNTQPFQFR MLVDEISHLM IFEATRDLNL REISVQTPVA 
TTKARKLATK VMICPILRAA LGMLDSVFTI IPDASVGFLG FQRNEKTAQA EFFYAKLPKD 
AKSRLAIIID PMFATGGTAI DAVKFLRENS VKQIKFISII AAPEGLRRFS EIYPDVEVYT 
AAIDERLNEK NYIVPGLGDA GDRVFNTL