Gene CCV52592_0541 details

Gene Information

• Locus tag: CCV52592_0541
• Symbol: selB
• ID: 5407668
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter curvus 525.92
• Kingdom: Bacteria
• Replicon accession: NC_009715
• Strand: +
• Start bp: 1703064
• End bp: 1704881
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640873156
• Product: selenocysteine-specific translation elongation factor
• Protein accession: YP_001408946
• Protein GI: 154174928
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00149249
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTGA TAATCGGCAC CGCCGGGCAT ATAGACCACG GCAAAACGGC TTTGATCAAG 
GCGTTAAACG GCTTTGAGGG CGATGTGATG GCGCAAGAAA AAGAGCGTGG CATCACGATA 
GATCTTAGCT TTTCAAACCT AAAAAGAGGC GATGAAAATA TCGCTTTCAT CGATGTGCCA 
GGGCACGAAA GCCTCGTTAA AACGATGATC AGCGGTGCAT TTGGCTTTGA TGCGTGTCTT 
TTGGTGGTCG CGGCAAACGA AGGCATAATG CCTCAAACCA AAGAACACAT CAATATCCTA 
AGCCTACTTG GCGTAAATTC CATTATAGTA GCCATAACAA AAAGCGATCT GGTAGGCGCG 
CAGGAGCTAG CCCAAAGAGA GCGCGAGATC AGAGACTACA TCGCAAAATT TCCAAATTTA 
CAGATCCTAA ACGTCTTTGC GACCAGCATA AAAGACGAGC AAAGCATCGC GGAGCTAAAA 
AACTATCTTT TTAACATAAA GCCTAAGAAG CGCGATATAG ACGGCGTTTT TCGCTATTAC 
ATAGACCGAG TTTTTAGCCT AAAGGGCATA GGCTCGGTGG TGACTGGTAG CGTGATAGAG 
GGCAGCGTGC GTAAAAACGA AAAGCTCTTT GACTGCGACC TTGGCAAAGA AGTGAGCGTG 
CGAAGTGTGC AGATGCACGA CAGCTTCGTA GAAAGCGCCA GTGCCAGTAA CCGCGTGGCG 
CTAAATTTAA CAGGCGTGGA GCTAAGCGAA CTAAAAAAAG GTCAGCTACT TAGCAAAAAG 
GGCTTTTTCA GGGGTTTTAA CGAAGCCGAT GCGGTCGTTT TTGCAGACCT CATGCACAAC 
CAAAACGTGA CATTTTGCGT AGGAAGCAAG CAGTGTGCGG CAAAAACGCT AGTTTTAAGC 
AAAGAAAGCG ATAGCCTTTT TGTTACGTTC AAATTTGAAA AAGAGATGTT TTTAAAATTT 
AACGAGCCTT TCGTGCTCAT CTCAAATGGT CGCGTCATAG GCGGCGGACG CGTGCTAAAT 
CCGATAATGG AGCCGATGAA AAAGCAGATC AAAATAGCAT TTTTAAACGC TCTTAACAAA 
AGCGACTTTA AAAGCGCCTT TACGATGCTA AAGGATATCC ATAAAAACGG CTTTGGCATC 
ATAGGCTCGT ATCAGCGCTT CGGCCTTACG CATGAAGAGG CGCTTGGCGT AGCAAAGAGC 
CTAAACAACG TCTTTGTCGA TGAAAAAGCA CTAAATATCT ACGACATAAA CGCTATCTCT 
CGTATAAAAA GCTTTGTGAA ATTCATACTC GAGAAAAACA AATTCGCCAT ATTTTCAGCC 
TCCTCGGTCG CATTAAAACT TGGCTGGGCG AGTGAAAATT TAGCCCAAAA GGCTATAGAC 
GAGCTGCAAG ATGAAGGTGC CATCGTCAAA AACGAGGGCG TTTATACCAA AAGCGGAGTA 
AATTTCAACG AGCTGAAGAT ACGCTTGGAG GATGAAATTT ATAAAATTTT AGACGCCGCA 
AAGCTTGCTC CGGAAGCTCC TTACAACATC TATGACCAGC TCGAGATAGA CCGCATCAGC 
GGCGATAATG CGCTAAAAAA GCTTACCGCC GCCGGTCGCG TCGTAAGGCT GGCGCACAAT 
CTCTTCATCA CGGCAAAATC GCTTGAAGAT GCGATGAATA GGCTGCGAGA GCTGATCAAA 
AAAGATGGTT TCGCAAACGT GCAAAACGCC AAAGACGCTC TAAATTTAAG CCGAAAATAC 
GTCATAGCCT ATCTTGAGAA CCTCGACCGC GCAAGCGACA TAGCAAAAGA CGGGCAAAAC 
CGAATTTTTA AGGGCTGA 

 

Protein sequence

MSVIIGTAGH IDHGKTALIK ALNGFEGDVM AQEKERGITI DLSFSNLKRG DENIAFIDVP 
GHESLVKTMI SGAFGFDACL LVVAANEGIM PQTKEHINIL SLLGVNSIIV AITKSDLVGA 
QELAQREREI RDYIAKFPNL QILNVFATSI KDEQSIAELK NYLFNIKPKK RDIDGVFRYY 
IDRVFSLKGI GSVVTGSVIE GSVRKNEKLF DCDLGKEVSV RSVQMHDSFV ESASASNRVA 
LNLTGVELSE LKKGQLLSKK GFFRGFNEAD AVVFADLMHN QNVTFCVGSK QCAAKTLVLS 
KESDSLFVTF KFEKEMFLKF NEPFVLISNG RVIGGGRVLN PIMEPMKKQI KIAFLNALNK 
SDFKSAFTML KDIHKNGFGI IGSYQRFGLT HEEALGVAKS LNNVFVDEKA LNIYDINAIS 
RIKSFVKFIL EKNKFAIFSA SSVALKLGWA SENLAQKAID ELQDEGAIVK NEGVYTKSGV 
NFNELKIRLE DEIYKILDAA KLAPEAPYNI YDQLEIDRIS GDNALKKLTA AGRVVRLAHN 
LFITAKSLED AMNRLRELIK KDGFANVQNA KDALNLSRKY VIAYLENLDR ASDIAKDGQN 
RIFKG