Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0515 |
Symbol | ispH |
ID | 5405985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 583909 |
End bp | 584733 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640872024 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001407857 |
Protein GI | 154173692 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAGATTG AGCTTGCTAG CAGCTACGGC TTTTGCTTTG GGGTAAAGCG CGCCATAAAG ATAGCCGAAA ATGCGGGCGA TGCCGCTACT ATCGGGCCTC TCATACATAA TAACGAAGAG ATAAACCGCC TGGCTACGAA TTTCAATGTC AAGACCCTCC ACGGCATAAA TGAGCTAAAG GACGAGAAAA AGGCCATCAT ACGCACTCAC GGTATCACAA AAAGCGATCT GGCCGAGCTT AAAAAGACCG ATATCAAAGT CATAGACGCC ACTTGCCCGT TCGTGACCAA GCCGCAGCAA ATTTGCGAGG ATATGAGCAA CGCAGGATAC GATGTCGTGA TATTTGGCGA TGAAAATCAT CCCGAAGTCA AAGGAGTGAA GTCCTATGCC AGCGGAAAGG TTTATGTCGT GCTCGATGAG AGCGAGCTTG AGGGAGTGAA ATTTAGACAA AAGGTAGCAC TCGTCAGTCA AACGACGCGC AAAGTCGAAA AATTTATGCA AATAGCGAAC TACTTGATGC TACGCGTCAA AGAGGTGCGA GTTTTCAACA CTATCTGCAA CGCGACCTTC GAGAATCAGG AGGCGGTCAA AAATTTAGCC AAAAGAGCCG ATGTGATGAT AGTCATCGGT GGTAAAAATA GCTCTAATAC AAAGCAGCTT TATCTGATAT CTAAAAATTT CTGCGAGGAC AGCTACCTGA TAGAGAGCGA ACACGAAGTC GAGAAAAGCT GGTTTGAAGG CAAGAATTTA TGCGGTATAA GTGCGGGAGC GAGCACGCCT GATTGGATCA TACAAAAAGT CGTCGACGCG ATAGAGAAAT TTTAA
|
Protein sequence | MKIELASSYG FCFGVKRAIK IAENAGDAAT IGPLIHNNEE INRLATNFNV KTLHGINELK DEKKAIIRTH GITKSDLAEL KKTDIKVIDA TCPFVTKPQQ ICEDMSNAGY DVVIFGDENH PEVKGVKSYA SGKVYVVLDE SELEGVKFRQ KVALVSQTTR KVEKFMQIAN YLMLRVKEVR VFNTICNATF ENQEAVKNLA KRADVMIVIG GKNSSNTKQL YLISKNFCED SYLIESEHEV EKSWFEGKNL CGISAGASTP DWIIQKVVDA IEKF
|
| |