Gene CCV52592_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_0506 
SymboldnaE 
ID5406912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand
Start bp592094 
End bp595699 
Gene Length3606 bp 
Protein Length1201 aa 
Translation table11 
GC content48% 
IMG OID640872033 
ProductDNA polymerase III subunit alpha 
Protein accessionYP_001407866 
Protein GI154174535 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATT TTACACATCT TCATCTACAT ACCGAGTATT CGCTACTTGA CGGGGCGAAT 
AAGATAAAAG AGCTGGCTCA CGTCTTGCAT GAGCGCGGCG ATACGAGCGC AGCCATAACC
GATCACGGCA ATATGTTTGG AGCGATCGAT TTTTACAAAA CGATGAAAAA AGAGGGCATA
AAGCCGCTTA TTGGCATTGA GGCTTATATC CACAACGCCG ATGATCTGGG CGATAAGAGC
AGCAAACAGC GCTTCCACCT GATCCTCATA GCTAAAAACG AGACCGGCTA CAAAAACCTG
ATGTATCTTA GCTCGATGAG CTATATAGAG GGCTTTTACT ACTATCCTAG GATCAATAAA
AAAATTTTAA AAGAGCATAG CGAGGGCATA ATCTGCTCGT CAGCCTGCCT TCAAGGCGAG
GTGAGCTGGC ATCTAAATTT AAGCGAGCGA AACCTGAAAT ACGGTGCCAA AGGCTACGAA
AAGGCAAAAG AGGTCGCGCT GGAATACAAA GAAATTTTCG GCGATGATTT TTACCTTGAG
ATCATGCGCC ACGGCATCGG CGATCAACGC AGGATAGACG ACGATATCCT AAGGATCGCA
AAGGAAACGG GCATAAAAGT CATCGCCACG AACGATACGC ACTATACTTT CAAAGAGCGC
GCCGACGCAC ACGAAGTGTT TATGTGTATC GCGATGAACA AACTGCTTGA CGATCCAAAC
CGCCTGCGCC ATAGCGTGCA TGAGTTTTTC GTAAAGAGCG AAGACGAGAT GAAGCGCCTG
TTTTTAGACA TCCCGGAAGT CATCGAAAAT ACAAAAGAGA TCGTGCAAAA GTGCAACCTT
GAGATCAAGC TTGGCAACCC TACGCCTCCA AATTTTAAAT TTACTCTTGA ATGTGCGGCC
GAGCGCGGGC TAAATTTACC AGAGCCCAAA AATAGATATA GCTTTAAAAA CGATACCGTA
TTTTTCGAGT ATGAATGCAA AAAGGGGCTT GAAGAGAGGC TGAAATTCGT CCCTGAAAAT
TTACACGAGG AGTATAAAAA GCGCCTCGAG CGAGAGATCG AGATCATAAA TAAGATGAAT
TTCTCGGGCT ATATGATGAT AGTTTGGGAC TTTATAAACG AGGCCAAGAG CCGCGGCGTG
CCGGTAGGTC CAGGACGAGG TTCCGCCGCT GGCAGCTTGG TCGCTTATTC GCTAAAGATC
ACCGACCTCG ATCCTATACC ATACAACCTG CTTTTTGAGA GATTCTTAAA CCCTGAGCGC
GTGAGCATGC CTGATATCGA CGTGGACTTT TGCCAAAGCA GACGCGGCGA GATCATCGAC
TACGTCACGC AAAAATACGG CAAGTATAAC GTCGCGGGCG TCATCACCTT TGGTAAGCTG
CTTGCAAAGG GCGTCATCCG CGATGTTGCG CGTGTTTGTG ACATGCCATA CGCCGAGGCT
GACGCGATGG CAAAGCTCAT ACCTGACGAG CTTGGCATCA CGCTAAAAGA TGCATTTGAA
AAAGAGCCAA AGATTAAAGA GCTGATCGAC AAAAATCCAA AGGCGGCTAA AATTTGGAAA
TTTGCGCTCG ATCTTGAGGG GCTCAACCGA AATGCCGGCC AGCACGCAGC AGGCGTAGTC
ATCTCAAACG AAGAGCTATG GCACAAAACG CCGCTCTTTC GCCAGCCAAA CAGCCCTGAG
GATCGCTACG TGACGCAGTA TAGCCTCAAA TATCTTGAGG ACGTGGATCT GATAAAATTT
GACTTTCTTG GGCTAAAGAC GCTTACGGTG ATCGACAACG CCATAAAGCT GGTCAAACGC
CGCACCGGCA AGGACGTCAT TTGGGAGCAG ATAGATAAAA ACGACAAGCC GGTTTATGAC
ATGATACAAA GCGGTCAGGC GATCGGCATC TTCCAGATAG AGGGCGAGGG CATGAGAAAG
CTAGGCACCA GCCTGCGTCC GGACTGCTTC GAGGACATCG TCGCGATGCT CGCACTCTAC
CGCCCGGGAC CGATGGAAAG CGGCATGCTA GATGACTTCG TCAAAAGAAA ACACGGCGAA
GCGGCGATCA CATACGCGTT TAAGGAGCTT GAGCCGATCC TGGCACCGAC ATACGGAGTC
ATCGTCTATC AAGAGCAAGT CATGCAGATA GTCCAAAAGA TCGGCGGCTT TAGCCTAGGA
GGCGCAGATC TCGTCCGCCG TGCGATGGGC AAAAAAGACC CCGAGCTACT TCGCCAGCAA
AAAGAGCTCT TCGTCGAAGG TGCTAAAAAA GAGGGCTTTA ACGTGCAAAA ATCCGGTGAT
TTGTTTGATC TGATCTTGAA ATTTGCGGGT TATGGCTTTA ATAAATCACA CTCCGCAGCC
TACGCTTATG TGACCTTTCA AACGGCCTTT TTAAAGGCTT ATTACCCGGC TGAATTTATG
GCTGCACTAC TAACTAGTGA GGAGAGCAAC GTAGATAAGA TCGTTCGCTA CATCGATGAG
AGCAAACGCC TAAAGATCGA TGTCCTCGCA CCGTCGATCA ACAAGTCGAT GAAGGAATTT
AGCGTCGTGG ACAACGGCGG ACACGATGGT ATCATCTTTG GCCTTGGCGC GATAAAGGGC
GTGGGTGGTG CAGCTATCGA GAACATCATC GCCGAGCGCG AAAGAGGCGG AGAATTTAAA
GACTTCAACG ATCTAGTCTC AAGGATAGAT GCATTCAAGG TCAATAAAAA GGTCTTTGAA
AGCCTCATAA AGGCGGGCTG CTTCGATGAA TTCGGTCACA CTCGCAAGAT GCTTTTAGCA
AACATAGAAA ATATAATCGA AGCTTGCAAA AACGCCGCTC AGATACGCAA AAACGCCGCC
CAGAGCCTAT TTGGCGAGGA CGAAAGCATG AACGACGTGA AGATAAATTT TGATCCTGTG
GACGGCGAAT ACGACATCAA GCAGATCTTA AAATTCGAGC AAGAAAGCGT GGGTATCTAC
CTCTCGGGCC ATCCGCTCGA TGACTACCGC GAGAAGATAA GCCAGATCAA ATACACCCTC
AGCTCGGAAT TTGAAAATTT ACCGCAAAGC GCCGAGATCT TGGTCGTCGG CAAGATCGAG
GACTTTAGCA CGCGCATAAC AAAGAGTGGC AAGAAAATGG GCACGATAAA CGTGCTTGAC
TTTCACGGCA ACATCGAGAT CGCGATATTT GAACGCGAGC TTGCAAATGT CGAGGACGTT
TGGAGCGACA GCGTGAAGCG CGATCTGCCT TATGCTTTTA AGATCAATAT CTCTCGCGAC
GATCAGTTCG TGAGGACGAA TTTAAACGAA TTTTACTCCC TCGAAGACGC TGTAAATTTA
GACTTTAAAA CAAGACAGAT AAGACAGGGC AATAAATTTC CAAGAGCCGC CGCAAACAGC
GCCGAGCCTG TCAAGGTCAG AAACTACGGC GTTTTGGAGA TACTCTTGAA TTTAAACGAG
CTAAATAAGC ATAAGATCGC TGAAATTTAT CATCTAGCCT TTACAAGGCA TGCTCTAGGC
AACGAAAAGC GCCTGGTTTT AAAGATAAAA AATGAAAATG CGGGCGAAAT TTTGGTCTAT
AACACGAGCT TTTTGGTAAA TGACGAGCTT GGTAGCGAGA TAGAAAAGCT GGCTCTGGGA
GCGTGA
 
Protein sequence
MSDFTHLHLH TEYSLLDGAN KIKELAHVLH ERGDTSAAIT DHGNMFGAID FYKTMKKEGI 
KPLIGIEAYI HNADDLGDKS SKQRFHLILI AKNETGYKNL MYLSSMSYIE GFYYYPRINK
KILKEHSEGI ICSSACLQGE VSWHLNLSER NLKYGAKGYE KAKEVALEYK EIFGDDFYLE
IMRHGIGDQR RIDDDILRIA KETGIKVIAT NDTHYTFKER ADAHEVFMCI AMNKLLDDPN
RLRHSVHEFF VKSEDEMKRL FLDIPEVIEN TKEIVQKCNL EIKLGNPTPP NFKFTLECAA
ERGLNLPEPK NRYSFKNDTV FFEYECKKGL EERLKFVPEN LHEEYKKRLE REIEIINKMN
FSGYMMIVWD FINEAKSRGV PVGPGRGSAA GSLVAYSLKI TDLDPIPYNL LFERFLNPER
VSMPDIDVDF CQSRRGEIID YVTQKYGKYN VAGVITFGKL LAKGVIRDVA RVCDMPYAEA
DAMAKLIPDE LGITLKDAFE KEPKIKELID KNPKAAKIWK FALDLEGLNR NAGQHAAGVV
ISNEELWHKT PLFRQPNSPE DRYVTQYSLK YLEDVDLIKF DFLGLKTLTV IDNAIKLVKR
RTGKDVIWEQ IDKNDKPVYD MIQSGQAIGI FQIEGEGMRK LGTSLRPDCF EDIVAMLALY
RPGPMESGML DDFVKRKHGE AAITYAFKEL EPILAPTYGV IVYQEQVMQI VQKIGGFSLG
GADLVRRAMG KKDPELLRQQ KELFVEGAKK EGFNVQKSGD LFDLILKFAG YGFNKSHSAA
YAYVTFQTAF LKAYYPAEFM AALLTSEESN VDKIVRYIDE SKRLKIDVLA PSINKSMKEF
SVVDNGGHDG IIFGLGAIKG VGGAAIENII AERERGGEFK DFNDLVSRID AFKVNKKVFE
SLIKAGCFDE FGHTRKMLLA NIENIIEACK NAAQIRKNAA QSLFGEDESM NDVKINFDPV
DGEYDIKQIL KFEQESVGIY LSGHPLDDYR EKISQIKYTL SSEFENLPQS AEILVVGKIE
DFSTRITKSG KKMGTINVLD FHGNIEIAIF ERELANVEDV WSDSVKRDLP YAFKINISRD
DQFVRTNLNE FYSLEDAVNL DFKTRQIRQG NKFPRAAANS AEPVKVRNYG VLEILLNLNE
LNKHKIAEIY HLAFTRHALG NEKRLVLKIK NENAGEILVY NTSFLVNDEL GSEIEKLALG
A