Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0493 |
Symbol | |
ID | 5406955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 604128 |
End bp | 604838 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640872045 |
Product | His/Glu/Gln/Arg/opine ABC transporter permease |
Protein accession | YP_001407878 |
Protein GI | 154174248 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTAACG AAAAATTTTT CAGGATTTTA TTTTTTGTCG TTATCGTGAC GCTTGGTGTT TATTATTTCT ATCCGACCGA GCTAAACGAG ATCCAGCGTG CAGCGTATCT TAAGAGCTAC GGCGTTACGC TAGGCCTCAC GCTTGGAGGC ATCTGCATCG GTATAGCGCT TGGCTTTTTA CTTGCGTTTT TGAAATTTCT AAATATTAAA ATCTTAAGCT TCATAATCGA CGAATACATC GACATTTTAC GAGGAACGCC GATCATTTTG CAGCTTCTCA TCTTTTCGGT GGTGATATTT GCCACATGGA GCGATAACTT TTACGTCGCG GTGATCGCAC TTGGGCTAAA CAGCTCGGCC TATGTCGCCG AGATCGTTCG CAGTGGTATA AACAGTGTCG ATAAAGGGCA AATGGAGGCT GCACGCGCGA TGGGGCTTAG CTACTCGGCA TCTATGCGCG AGATCATCTT CCCGCAAGCG ATAAAAAACA TCTTGCCGGC ACTTGGAAAC GAGTTCATAT CGCTCTTTAA AGAAACCTCC GTTGTAGGCT ACATCAGCGT CATGGACATA ACCTTTCAAA GCAAGAGTTT TCAAGCCATT TTGTATAATC CAAAACCAGT CATCTTTGCC GGAGTGGTCT ATTACATCAG TGTCAAAATT TTATCCTTTT TGACGAAGAC ACTGGAAAAA AGGTTGAACC GCCATGATTG A
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Protein sequence | MLNEKFFRIL FFVVIVTLGV YYFYPTELNE IQRAAYLKSY GVTLGLTLGG ICIGIALGFL LAFLKFLNIK ILSFIIDEYI DILRGTPIIL QLLIFSVVIF ATWSDNFYVA VIALGLNSSA YVAEIVRSGI NSVDKGQMEA ARAMGLSYSA SMREIIFPQA IKNILPALGN EFISLFKETS VVGYISVMDI TFQSKSFQAI LYNPKPVIFA GVVYYISVKI LSFLTKTLEK RLNRHD
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