| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0491 |
|---|
| Symbol | putP |
|---|
| ID | 5406526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 604996 |
|---|
| End bp | 606483 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640872047 |
|---|
| Product | sodium/proline symporter |
|---|
| Protein accession | YP_001407880 |
|---|
| Protein GI | 154173948 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGA GCTCTTATAT CGCGATCGCT ATATATTTTG GATTTTTGCT GTTTGTCGGA
CGTTATTCTT ATAATAAAAA TGCAAATATG GGCGAATATC TGTTGGATAA CCGCCGCCTA
GGCCCAGTCG TGACCGCTCT AAGTGCCGGA GCTAGCGATA TGAGCGGCTG GATGCTTCTT
GGCGTGCCGG GTGCGCTTTA CGCCACGGGG ATCGCCACTG CATGGATGGC GATAGGCCTT
ACCATAGGAG CGTATTGTAA TTATTTATTT CTTGCCAAGC GACTGCGCGT TTATACCGAA
GTCGCAAGCG ACAGCATAAC GATACCTGAT TTCTTGGAAA ATCGCTTCAA GGATAGGACT
AAAATTTTGC GCATAGTCTC GGGGCTAGTC ATCTTGGTAT TTTTCACGCT TTACGTTTCA
AGCGGTATCA TCGCGGGCGG CAAGAGCTTC GAGAGCTTTT TTGGCTTGCC GTTTGACTAC
GGAGCGATAT TTACCTTGAT GATAGTCGTT TTTTATACGT TTTTTGGCGG GTTTCGCGCG
GTTTGTATCA CCGATGCGTT TCAAGGAGCT CTCATGTTTT TCGTGCTCGT AGCGATCCCG
GTCGTGGGAT TTTTAAATTT AGATATCCCA AGCGATACGA ATTTTTGGAG AGAGCTATAT
AGGCTAAGCC CTAGTCATCT TGATATGTTT GCAGGACAGA GCTTTTGGGG CATTTTGGGG
CTTTTGGCGT GGGGGTTCGG GTATTTTGGG CAGCCTCACA TCATCGTTAG ATTTATGGCG
ATACGAGACT CAAAAGAGCT CGCACAAGCC CGCAGGATCG GTATTGGCTG GATGGCGATA
GGTCTCATCG GAGCGATGAT GAGCGGGCTT ATCGGCTTTG TATATTTTAG CACCAGAGGA
GGGCTAAGCG ATCCTGAGAC CGTGTTTTTA AAGCTTGGCG AGCTGCTGTT TCCGCCATTT
TTTATAGGTA TCATCGTATC GGCGGTACTT TCTGCGATCA TGAGCACGAT ATCAAGCCAG
CTTCTAGTGA CTTCAAGCTC GGTGACTAAG GATTTCATAT TTGCCTTTTA TAAAAAGGAC
GTGAGCGAAA AGATGCAAGT AGCGCTTAGC CGATACGCCG TAGTCGCAGT GGCACTCGTG
GCTACCTTGC TAGCTTTTCT CTCAACCGAT AGCGTTTTGA ACGTAGTCGG CAACGCATGG
GCGGGCTTTG GCGCGAGCTT TGGACCGGTT TTGCTTTTTA GCCTTTATTG GAAGCGTATG
AGTGCGCTTG GCGCGCTTGT AGGCATGATA GCCGGTGGTG CGACGGTGCT TTTTTGGATA
AGCTCGGGAC TAAACGCCTA TGTGTATGAA ATTTTGCCCG GTATCATCGT CTCCAGCGTA
GCTATCGTGA TCGTAAGCAT CTGGGGCGAT GCGATAAACA AAATGACTAG CGAGCCGCAT
GAGCAGGTCA TAAAAGACGA ATTTGAGAAG ATGAAAACGA GGCTTTGA
|
|---|
| Protein sequence | MSLSSYIAIA IYFGFLLFVG RYSYNKNANM GEYLLDNRRL GPVVTALSAG ASDMSGWMLL
GVPGALYATG IATAWMAIGL TIGAYCNYLF LAKRLRVYTE VASDSITIPD FLENRFKDRT
KILRIVSGLV ILVFFTLYVS SGIIAGGKSF ESFFGLPFDY GAIFTLMIVV FYTFFGGFRA
VCITDAFQGA LMFFVLVAIP VVGFLNLDIP SDTNFWRELY RLSPSHLDMF AGQSFWGILG
LLAWGFGYFG QPHIIVRFMA IRDSKELAQA RRIGIGWMAI GLIGAMMSGL IGFVYFSTRG
GLSDPETVFL KLGELLFPPF FIGIIVSAVL SAIMSTISSQ LLVTSSSVTK DFIFAFYKKD
VSEKMQVALS RYAVVAVALV ATLLAFLSTD SVLNVVGNAW AGFGASFGPV LLFSLYWKRM
SALGALVGMI AGGATVLFWI SSGLNAYVYE ILPGIIVSSV AIVIVSIWGD AINKMTSEPH
EQVIKDEFEK MKTRL
|
|---|
| |