| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0348 |
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| Symbol | dapF |
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| ID | 5407398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | + |
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| Start bp | 73458 |
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| End bp | 74207 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640871526 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001407369 |
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| Protein GI | 154174386 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGTAT CAAAGTATAA CGCAAACGGC AATGACTTCG TGATATTTCA TACGTTTGTT
AGTGCGGATA GAAGCGAGCT TGCTGCGAGG CTTTGCGACC GATATAACGG CATCGGTGCA
GACGGACTGA TCGTGCTAAA ACCGGACAAG GATACTAACG AAATCGTTTG GGAATTTTAT
AACTCCGATG GAAGCCATGC GGATATGTGT GGTAACGGAT CACGTGCAGC AGCCCAATAC
GCCGTAGACA ATCAACTTTG CACTAATGTA TTTGACCTGG TGACCGGAAG CGGCATAGTT
AGTGTAAACG TTAGTAAAGA TGGCGTAGAA GTAGAGCTGA CTAGCCCTAA AATTCTTAGT
AATAAGCCCA TAGATGAGTT TGGCAAGATA TGGCATTTTT ATGATACCGG TGTACCCCAT
CTTGTTAGTT TTGTTAGCGA CTTGAATGAA TTTGACATCC AAACTTGCCG AGATCTCCGC
TATAAATATA ATGCTAACGT GAATTTAGCC AAGTTGGAAA ATAATACTAT TTATGTTCGC
ACTTATGAGC GCGGTGTGGA AAATGAGACA CTAGCGTGCG GTACAGGTAT GGCTGCATGT
TTTTACGGTG CGGTTTTAAA TTTTAACGCA TCTAGGTGCT GCAAAGTGTA TCCAAAAAGC
GGTGATGAGC TTGGCTTAAG ACTAGAAAAT GGTAAAATCT TCTTCAAGGG AAAAGTAAAA
CATTGTTTTG ATGCTTATAT AGATGTTTGA
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| Protein sequence | MIVSKYNANG NDFVIFHTFV SADRSELAAR LCDRYNGIGA DGLIVLKPDK DTNEIVWEFY
NSDGSHADMC GNGSRAAAQY AVDNQLCTNV FDLVTGSGIV SVNVSKDGVE VELTSPKILS
NKPIDEFGKI WHFYDTGVPH LVSFVSDLNE FDIQTCRDLR YKYNANVNLA KLENNTIYVR
TYERGVENET LACGTGMAAC FYGAVLNFNA SRCCKVYPKS GDELGLRLEN GKIFFKGKVK
HCFDAYIDV
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