Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0250 |
Symbol | |
ID | 5407731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1332572 |
End bp | 1333147 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640872776 |
Product | Sel1 repeat-containing protein |
Protein accession | YP_001408593 |
Protein GI | 154174541 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00025154 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTAAAT TTTGGGGGAG CGACGTGAGA AAATTTATAT TGAGCGTTTT GGCGGTTTTG CTTTTTGTCG GGTGTGCGAG TGAGCAAGTA GATGAAATTT TAGGCCTTTC AAAGCCTAAG GACGATCCTG AAGTCGTCCA GATGATGGAC GCGATATATC TTCACAATCA AAAAGAATAT AAAAAGGCGT TTCGTCGCTT CGAGCGCTAT GCAAAAGAGG GTAACGTGCT TGCGATGTAT CAAGTGGGCT TGTGCTATCG CGACGGCCTT GGCGTGAGTA AAGATATGCT GCGAGCGTTG TTTTGGTTCA AGACTGCCGG CAGATACGGA CACAAAGATG CACTGCGAAA TGCAGGATAC ATCTACGAAT ACGGCCTTGG CGTGAACAAA AACGTCAAAA AGGCTATGGC GTATTATTAT GAAGCGGTAA ATTTAGGCTC AAACGAGGCC GCTTTCGAGC TTGGCTCGCT ATATCTTTTG CAAAACGAAT TCAAAGACGC GAGATATTTT TTAAACCTCT CTTGTGGCGG TGGCGTCAAA GAGGCCTGCG ATAAGCTGGC AACGATGAAA TTTTAA
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Protein sequence | MAKFWGSDVR KFILSVLAVL LFVGCASEQV DEILGLSKPK DDPEVVQMMD AIYLHNQKEY KKAFRRFERY AKEGNVLAMY QVGLCYRDGL GVSKDMLRAL FWFKTAGRYG HKDALRNAGY IYEYGLGVNK NVKKAMAYYY EAVNLGSNEA AFELGSLYLL QNEFKDARYF LNLSCGGGVK EACDKLATMK F
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