Gene CCV52592_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCV52592_0243 
SymbolrfaD 
ID5406333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter curvus 525.92 
KingdomBacteria 
Replicon accessionNC_009715 
Strand- 
Start bp1338109 
End bp1339098 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content45% 
IMG OID640872782 
ProductADP-glyceromanno-heptose 6-epimerase 
Protein accessionYP_001408599 
Protein GI154175499 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAG ACGGTAAAAA CATAGTCGTA ACTGGAGGCG CAGGCTTCAT CGGCTCGGCC 
TTGGCGCATT ATCTCGACGA AAATTTCAAA GACGCGCGCG TTTTGGTCGT GGATAAATTT 
AGAAGCAATG AGACCTTTAG TAACGGGAAT TTAAAGAGCT TCGGGCATTT TAAAAATTTA 
CTGGGCTTTA AAGGCGAAAT TTTTGCAGGC GATATAAACT GCAAAGACAC CTTGCAAAAG 
ATAGCGGATT TTAGGCCGGA CGTGATCTTT CACGAGGCGG CGATCTCGGA TACTACGGTT 
CGCGAACAAG ACGAGCTTGT AAAAACTAAC GTAAACGCCT TTGTAAATTT GCTAGACATC 
TGCGAAAGCG GTGGTACAAA AATGGTTTAT GCGAGCTCCG GCGCTACATA CGGCAACGCA 
AAAAGCCCGC AAAAAGTCGG CGAATGCGAA GCCCCAAACA ACGTATACGG CTTTAGCAAG 
CTCGCGATGG ATAATATCGG CAAAATCTAC GCCAAGCGCG GTGTAAGTGT AGTCGGACTG 
CGATATTTCA ATGTTTACGG CAAGGGCGAG TTTTTCAAAA ACAAGACCGC ATCGATGATC 
TTGCAGTTTG GGCTTCAAAT TTTAGCTGGC AAAGCGCCGC GATTATTTGA GGGAAGCGAC 
AAGATAAAAA GAGATTTTGT ATATATAAAA GATATCATAA ATGCGAATTT AAAGGCCCTT 
GACGCGCCAA GCGGCGTTTA TAACGCAGCG ACGGGAAGGG CCAGAAGCTT TCAGGATATC 
GCCGATATAT TGCAGCGTGA GATCGGCGTA AATTTGGGGA ACGAATACAT CAAAAACCCA 
TACCTAGGCT CTTATCAGTT TCACACCCAA GCTGGCATAG AACCGACCAA AAAGGCTCTA 
GGATACGAGA GTCAGTGGAG CCTAGAAGAG GGCATTAAAG ACTATTTGCC TGAGATAAAG 
AGGATCTTTA AGGAAGAGAT AAATGGCTAA
 
Protein sequence
MNLDGKNIVV TGGAGFIGSA LAHYLDENFK DARVLVVDKF RSNETFSNGN LKSFGHFKNL 
LGFKGEIFAG DINCKDTLQK IADFRPDVIF HEAAISDTTV REQDELVKTN VNAFVNLLDI 
CESGGTKMVY ASSGATYGNA KSPQKVGECE APNNVYGFSK LAMDNIGKIY AKRGVSVVGL 
RYFNVYGKGE FFKNKTASMI LQFGLQILAG KAPRLFEGSD KIKRDFVYIK DIINANLKAL 
DAPSGVYNAA TGRARSFQDI ADILQREIGV NLGNEYIKNP YLGSYQFHTQ AGIEPTKKAL 
GYESQWSLEE GIKDYLPEIK RIFKEEING