Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0178 |
Symbol | rplA |
ID | 5406283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1398057 |
End bp | 1398758 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640872847 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_001408644 |
Protein GI | 154174428 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0966549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAA CTACTAAAAG ATTTCAAGAG CTACTTAAAA AAGTAGAAGA AAATAAAATT TATAATCTTG ATGAAGCGAT CACTACGATC AAAACTTTAG CGTCTGCTAA ATTTGATGAA ACCGTAGAAA TAGCGCTTAA GCTCAACGTT GATCCAAGAC ATGCCGACCA GATGGTTCGT GGCTCTGTGG TATTGCCGGC TGGAACAGGT AAAACCGTTC GTGTCGCCGT CATAGCAAAA GACGCCAAAG CCGACGAGGC AAAAGCTGCG GGCGCAGATA TCGTGGGCTC TGATGAGCTT GTTGAGGATA TCCAAAAAGG CATCATGAAT TTCGATGTTC TTATCGCTAC TCCAAATTTA ATGGGTCTAG TAGGTAAAGT CGGTCGTATC CTTGGACCAA AAGGCTTAAT GCCAAATCCA AAAACAGGGA CCGTTACTAT GGACGTAGCT CAAGCTGTAA ACAATGCAAA GAGCGGTCAA GTAAATTTCC GTGTCGATAA ACAAGGAAAT ATCCATGCAG GGCTTGGAAA GGTCAGCTTT AGTAAAGAAC AGCTAAACGA GAATATCTCA ACTTTTATAA AAGCCATAAA TAAGCATAAA CCGTCTGCTT CAAAAGGTAG ATATGTCAAA AATGCTTCGT TGTCATTGAC GATGAGCCCG TCTATCGCTC TTGATACTCA AGAAGTGATG GATCTAAAAT AA
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Protein sequence | MGKTTKRFQE LLKKVEENKI YNLDEAITTI KTLASAKFDE TVEIALKLNV DPRHADQMVR GSVVLPAGTG KTVRVAVIAK DAKADEAKAA GADIVGSDEL VEDIQKGIMN FDVLIATPNL MGLVGKVGRI LGPKGLMPNP KTGTVTMDVA QAVNNAKSGQ VNFRVDKQGN IHAGLGKVSF SKEQLNENIS TFIKAINKHK PSASKGRYVK NASLSLTMSP SIALDTQEVM DLK
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