Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0162 |
Symbol | nfo |
ID | 5406489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1407849 |
End bp | 1409798 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640872863 |
Product | endonuclease IV |
Protein accession | YP_001408655 |
Protein GI | 154175034 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.963348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTAT TTAAACAGAT CATGTTGGCT GTGATAGCTT TTGGTATCGT GATATTCATG GCGGTAGGAT ATTTGAATTT TAAAAGCTTA AATAGCTACA TCAACGATCA GCTTGGTGAA AATGCCAGGC ATACGGCAAA TTCTTTAGGA CTGGCGCTAA AGCCTATCAT AGATCCCGAC GATATGTCGA TGGCTGAAAC GATGATAAAT TCGATGTTTG ACAGCGGTCG CTATCAGCTC ATAAAGCTTG AAGACGTAGA CGGGAAAATT TTGATAGAAA GCTCTCAGCC TACCCAAGCT ATGGGCGTAC CGGAGTGGTT TTTCAAATTT GCAAAATTTG AAGCGCCTAT CGTTCAAAGC GAGATAATGA CCGGCTGGAC GAAATTTGGC ACTCTTTACG TTCAAGGCAG CACCGCGCTT GCTTATAACG AGCTTTACTC CAATATAAAA AATATATTTG AATTTCTACT CGCCATGATA GCTGTCTCGC TTGTGGTGAG TTATTTCGGG CTAAAGGCGA TATTCAAGCC TTTATTAAAG GTGCAAAATC AAGCCGAAGC GATACTTGAT AATAAATTCT TGATCCAAGA AAAGATCCCT TTCACGACCG ATCTTAGGCA GATGGTGCTT GCGATGAACT CGATGGTCAA AAAAGTCGAG GATATATTTG AAAGAGAGGC CGCTACGCTC AATAAATACC AAGAGCTGCT TTATAAAGAC GGCATGAGTG GAGCTTACAA CAGGAGATTT TTCCAGACTA AATTTAGCGA ATACCTTGTA AGCGAGGAGT ATTCTCGCGG TGCGATTGTG CTTATAAGCT TTAAAGAGCT TGTAAATTTA AAGAAAATTT TAGGCTTTGA GAAATGGCAA AGCTTTATTA TAAAGATCGC TCAAATCTTA AAAAGCTGCG TCGACGAGAG CAAATTTAAC GCCGTGATAG CCAGGCTAAA TGACAACGAC TTTGCGCTCT TGATGCCGAG TGTAGATCCT CAAAGCGTTA CCGGCCTTAC GGAAAAGATA ATGGACGAGA TGAAAAAAAC GTATCAGCAT TTTGCCATCA ACGAAAACGA GTATCCGGCA AACGCCGCGA TAGTGGATTA CGAGCCAAAA AGCCAAATAG GCACTTTGCT GACGACAGCT GATGTGACAC TGGCAAATGC ACGTTTAGAG GGAAATTTCA CATATAAAAT TTTTAAAGAC AGCACGAATG CGCTCATCAT GGGTAAGGAA AAATACCGAG ACCTCATATC AAAATCCATG CAAAACGATA TGTTTAAATT CGCCTCTCAA AAGGTCGCCA GCAGCGATGA TAAATTTGAG CAATACGAGC TTTACTTGCG TCTTGTGGAC GATGAGGGTA AGTGGCAGAT GGCTTCTTAT TTCATGCCGA TGGTAAACGA ACTCGACCTT GGCGCGGCAC TTGATCTGCA TATTTTAAAC AGGATAGCTC AAATTTTACC TAGCAAAATT TTACCCGATG GCTCTTTGGC GATAAATTTA GGCAAGGAAA TTTTAAATTC CGACGAGAAT TTTTACAAGC TTGAGGCTGT GCTTAAGAAA ATAAGCGCTT CGTCTAAATT TAAAAACTAT ATAGAAATTC CAAACAAAGA CGATATTAGC TTGCAAAGCG TGATAAAGCT CACGAATAAG CTCAAGGAAT TTGGCTTTGG CTTTGGCTTT GATCACTTCG GGCTTGATGC TAAAAGCATA GAGAGGCTAA AGGAGCTAAA TCCTGATTAT GTTAAAATTC AAGCCGCAAA CATCATAGAC TTTTTTAGTG AAAACGGCAG TGCACAGACT AGGCAGTCGC TTGAGGTCAT CATGAATTCT AAGGACATCA AGCTCGTAGC CATCGGTGTT GAAAACGAGG AGCAAAAGAA AAAGCTGCTC GAGCTTGGCA TTATGAATAT GCAAGGAATT TATATCGATG AGATCAAAAA TATTGGATGA
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Protein sequence | MTLFKQIMLA VIAFGIVIFM AVGYLNFKSL NSYINDQLGE NARHTANSLG LALKPIIDPD DMSMAETMIN SMFDSGRYQL IKLEDVDGKI LIESSQPTQA MGVPEWFFKF AKFEAPIVQS EIMTGWTKFG TLYVQGSTAL AYNELYSNIK NIFEFLLAMI AVSLVVSYFG LKAIFKPLLK VQNQAEAILD NKFLIQEKIP FTTDLRQMVL AMNSMVKKVE DIFEREAATL NKYQELLYKD GMSGAYNRRF FQTKFSEYLV SEEYSRGAIV LISFKELVNL KKILGFEKWQ SFIIKIAQIL KSCVDESKFN AVIARLNDND FALLMPSVDP QSVTGLTEKI MDEMKKTYQH FAINENEYPA NAAIVDYEPK SQIGTLLTTA DVTLANARLE GNFTYKIFKD STNALIMGKE KYRDLISKSM QNDMFKFASQ KVASSDDKFE QYELYLRLVD DEGKWQMASY FMPMVNELDL GAALDLHILN RIAQILPSKI LPDGSLAINL GKEILNSDEN FYKLEAVLKK ISASSKFKNY IEIPNKDDIS LQSVIKLTNK LKEFGFGFGF DHFGLDAKSI ERLKELNPDY VKIQAANIID FFSENGSAQT RQSLEVIMNS KDIKLVAIGV ENEEQKKKLL ELGIMNMQGI YIDEIKNIG
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