Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0159 |
Symbol | hemN |
ID | 5407429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1412277 |
End bp | 1413638 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640872866 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001408658 |
Protein GI | 154174680 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.219729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGATT TTAGCGCCTA TGTGAAGTAT TCGCGTCCGG GACCGCGCTA CACGAGCTAT CCGACTGCGC CAGAATTTAG CGATAAATTT AGCTACGAGG ACTACGTAAA CGAGCTCAAA AATCGCGATA AAAGCCGCCC TCTCTCGCTT TATCTGCACC TACCGTTTTG TAGGAGTGCG TGCTATTTTT GCGGCTGTAA CGTGATCTAC ACGAGCAAAG ACGACCGCAA AGAGCGATAT ATCGGCTACC TTGAAAAGGA GCTTGAAATT TTAAGCACAC ATCTGGATAC TAGCGTGCCC GTGCTGCAAA TGCACTTTGG TGGCGGCACT CCGACATTTT ACGATGCCAC TCAGCTTGAC AGGATCATTC GCCTTATAAA GGCGAAATTT CAAAATTTCT TGCCAAACGC CGAAGTAAGC TGTGAGATCG ATCCCAGGTT TTTAAACGAA GCGCAGCTTG ACGTGCTGGT CTCGCACGGC TTTAACCGCG TTAGCTACGG CGTGCAGGAC TTTGATGAGA AGGTTCAAAA AGAGATCCAC CGCATCCAGC CATACGAGAT CACGCAAAAT GCGGTGAATT TAGCGCGTAA AAAGGGCATA AACTCGGTAA ATATGGACCT CATTTACGGC CTACCTTATC AGAGTTTAGA TAGCTTTAAG CACACATTAG AGCTTGCCCT CACGCTCGAT CCGGACCGTC TTGCGATATT CAACTACGCT CACGTGCCGT GGATAAAAAA GTCTATGCGT AAATTTGATG AAACGACGCT GCCAAGCCCG CAGGTAAAGC TTGAAATTTT AAAATATACG GCGGAATTTT TGACGAAAAA CGGCTACAAG ATGATAGGGA TGGATCACTT CGCAAAGCCA AACGACGAGC TTTTTGCCGC ACTTGCAAAT GGCACGCTGC ATAGGAATTT CCAAGGCTAC ACGACAAAGG GCGGAGCCGA TCTGATCGGT ATCGGCGTCA CTAGTATCGG CGAGTGCAAA CGCCATTACG CGCAAAATTT CAAAGATATG GATCAGTATG AAGCCGCGCT TGATAGCGGG ATCTTGCCTT ATGCAAAAGG TATTTATCTA AGCGATGAGG ACTTGCTCAG AAAGACCGTG ATAATGAGTC TGATGAGTAA CTTTACACTC GATATAAAGG CGGTCGAGGC CGAATTTGGC GTGAAATTTT TCGAGCATTT TAAAGGCGAG CTAAAACAGC TTGAAGAGCT GAAGGATTTT GTAAAGATCA CTCCTGAAAA GATCAGCGTA AATGAGACGG GGACGCTCAT CATCCGTAAT ATCGCGATGT GCTTTGACGA GTATTTGCAA AAAATTCCTG AAAATTTGAG GCGCTACTCA AAAACGATTT AA
|
Protein sequence | MIDFSAYVKY SRPGPRYTSY PTAPEFSDKF SYEDYVNELK NRDKSRPLSL YLHLPFCRSA CYFCGCNVIY TSKDDRKERY IGYLEKELEI LSTHLDTSVP VLQMHFGGGT PTFYDATQLD RIIRLIKAKF QNFLPNAEVS CEIDPRFLNE AQLDVLVSHG FNRVSYGVQD FDEKVQKEIH RIQPYEITQN AVNLARKKGI NSVNMDLIYG LPYQSLDSFK HTLELALTLD PDRLAIFNYA HVPWIKKSMR KFDETTLPSP QVKLEILKYT AEFLTKNGYK MIGMDHFAKP NDELFAALAN GTLHRNFQGY TTKGGADLIG IGVTSIGECK RHYAQNFKDM DQYEAALDSG ILPYAKGIYL SDEDLLRKTV IMSLMSNFTL DIKAVEAEFG VKFFEHFKGE LKQLEELKDF VKITPEKISV NETGTLIIRN IAMCFDEYLQ KIPENLRRYS KTI
|
| |