Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0096 |
Symbol | |
ID | 5406157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | + |
Start bp | 115688 |
End bp | 117205 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640871575 |
Product | transporter, Ni2+-Co2+ transporter |
Protein accession | YP_001407417 |
Protein GI | 154174366 |
COG category | [R] General function prediction only |
COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00355357 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGTGC GCGTCCTTTT GCTAAGCCTA GTTTATCTGC AGGCCTTTGG ATGCGCACTC TGCTCGCTTT ATAGTCCGAC CGCGCACGTA AATACCGCAT TTGAGGTCAA ACAAAACAAA ATTTCGGCGA TAAAATTCAC ATGGACTTTT TCTGAGAATT TCTCACAGCT CATGCAGCAA AATTTCGACC TGAATTCTGA TAAAAAGATC GATGACAACG AGCTTCGCCA GATACGTTTA AATTTACTTG ACTACCTTGT CCCGAGGCAT TTTCTAGTAG ATATAGAGCA TTTTTACAAG GACGAAAACG CCACTAAGCT AAAGCTGAAT TTAAGGGATT ACAAGCTTTA TTTCGACGAG GGACGGCTGA AATTCAATCT TGCGTTCAAC ACCGACTTGC CTATAAAAAA CGACTATGTC ATCTCGGTCG AAATTTTCGA TAAAGAGGGA TATTTCAACT TCAAGTTCCT AGACAGCGAC GCTTTTAAAA TTTCGCCCAA AGTCTGGGTC ATACCAAATC CAAACTCAAA CGTCATCTTT TACACGCTCT CGACCGAGCA AAGCGCCAAG GAGCACAACG AAAAGCCAAG CTTGAGTGCG GTCGTAAAGC AGCAAAACGA GCATGCCGAT ATAGACGCGA TCGACGAGCA AAAATTTGAC TCCGTCACAA GGGCCAGCCT TGGCTTTTTA GACGAGCTAA AGCAGCTTTT GCGGCAAAAT TCCGAAACGT TTAAATTCGC CTCGTTTTCG TTCATGCTGC TTTGCTCGTT CATCTACGGC TTTTTACACG CTGCGGGCGC GGGGCACGGC AAGATGCTCA CGGGTTCGTA TTTTGCGGCG ACCGGGGGCA GCTACATAAA GGCCGCTCTC TTTTCGCTAA AGATCGGCTT TTTACACGTC ATCGGCGCGT TTTTGTTCGT TTGCCTGATG TTTGCGCTGC TTTCAGGAGT GAGTGCTGGC TACACTAAAG ACGCGGGTAG GATAACGACC GTCGCTTCGG CGATAGTCAT CATCGCCATT TCGCTTTATA TGTTTTATAA AAAGCTGAAA TTTTACACCT CAAAGCCTAC GACCGGGCGA AATTCTTATA TTTTTGACGT TCTTAAAAAC GGCACGCCTG ACGCCACCCG CGCTAAGATG AAATTTCAGC CCGCAGCACA CGCGGCTCAG TGCGGCTGTA ATCTCTGCGC ACAGAAAAAA GCCGGGCCAA AGAGCTATCA CGAGTGGCTG GTAGCCGCCG CTGCGGCACT TATCCCGTGT CCTGGTACGA TCCTGGTTTT CGTGCTGGCT CACGAGCTTG GAAGCTACTT TGCAGGCTTT ATGAGCGGCG TATTTATGGC ACTTGGTATG AGCGCGATCA TATTCATCGC CGCGGTCTTT GGCGCTAAAC TAAATCAAAA CGCCTTTAGC AAGCTCAATC ATTTTAAAAT TTACGCTGAA TTCCTGGCTC TTGCAGTGAT GCTCGGGCTC GGGGTTTTCA TACTTTTTAC GACTACGACG CAAGTGAGTG TATTTTGA
|
Protein sequence | MLVRVLLLSL VYLQAFGCAL CSLYSPTAHV NTAFEVKQNK ISAIKFTWTF SENFSQLMQQ NFDLNSDKKI DDNELRQIRL NLLDYLVPRH FLVDIEHFYK DENATKLKLN LRDYKLYFDE GRLKFNLAFN TDLPIKNDYV ISVEIFDKEG YFNFKFLDSD AFKISPKVWV IPNPNSNVIF YTLSTEQSAK EHNEKPSLSA VVKQQNEHAD IDAIDEQKFD SVTRASLGFL DELKQLLRQN SETFKFASFS FMLLCSFIYG FLHAAGAGHG KMLTGSYFAA TGGSYIKAAL FSLKIGFLHV IGAFLFVCLM FALLSGVSAG YTKDAGRITT VASAIVIIAI SLYMFYKKLK FYTSKPTTGR NSYIFDVLKN GTPDATRAKM KFQPAAHAAQ CGCNLCAQKK AGPKSYHEWL VAAAAALIPC PGTILVFVLA HELGSYFAGF MSGVFMALGM SAIIFIAAVF GAKLNQNAFS KLNHFKIYAE FLALAVMLGL GVFILFTTTT QVSVF
|
| |