| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0088 |
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| Symbol | |
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| ID | 5406032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | - |
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| Start bp | 109590 |
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| End bp | 111152 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640871568 |
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| Product | type III effector HopAH2-2 |
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| Protein accession | YP_001407410 |
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| Protein GI | 154174921 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000528702 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGG TCCTACACAT CAAAACACTT ACGTTGATTT TGGTTTTTAG TATTTTTATG
TCTTTACTAA ACTACCAATT TTTCTTATTC TGCTTTAAAG ACATAAGCTT TGATGGTAAT
AAAACGATAT TTTTCACGCT TCCTATCATA TATTTTATAT TGACGAATTT CATATACTCG
GTCCTACTGA TACCTTATAT TTGGAAATTT ATCGCGGTAC TTACGGTGCT GATAAGCAGT
TTAAGTGCTT ATTTTATGGG TGCTTACGGT GTTATTTTAG ATAGCGAGAT GATAAGAAAT
GTGTTCGAGA CCAATCCAGC TGAAGCCGCA AGCTATCTAA ATTTTAATCT AGTACTATGG
CTCGTTTTTA CCTGCATTTT GCCGATAATC TACATCATAA AAGTAAAAGT GCGATACGTA
AATTTCAAGC AAGAGCTCAT CAAAAGAGTC TCATTCACGC TTGGCTGCAT AGTCATTTTG
GGGGTATTTA GTGTATTTTT GACAAAAACA TACATGCCCT TTTTTAGAGA GCACAACCAT
GCCAGATTTT ACAACCTGCC ATTTTACCCG ATATATTCGA CCAATAAATT CATAAAACAA
AGGTATTTTT ATAAAAAAGA GGAATTCAAG ATCATAGCAG CCGACGCCAC GAGAGTGAAA
GGTGACAGGC AAAAGATCCT TATTTTCATA GTCGGCGAAG CGGCGCGCTC GGCAAACTAC
TCGCTAAACG GCTACAAGCT ACACGATACG AACAAATTTA CTCAAGCTAA AGACGTGGTG
AGCTTGCCGG ATTTCTACTC TTGCGGCACG GCTACGGCCC AGTCCGTCCC TTGCATGTTT
TCAAATTTAG GACGTGAAAA TTTCTCGGTC GATAAGGCGA ACAACCAAGA AAACGCGATC
GACATCCTGG CAAAAACAGG CGTTGATGTG TATTGGGCCG AAAACGACAA CGGCTGCAAG
GGAGTGTGCG ACCGTATGAA AAATGTAATC CAAAGAGACG TCGGCATGGA TACCGTGCTA
CTTGAAGACG CTAAAAACTG GCTAGAGATC GCCAAAAAAG ATGGCAACGA TACGGCGATA
TTCATCCACA TCATCGGCTC GCACGGACCG ACATATTTTG AGAGATATCC AAAAGAATTC
GCCCAGTTTA GCCCGTCTTG CGAAACGAGC GAGCTAAAAA ACTGCAGTAG CGAAGAGATC
GTAAACGTCT ATGACAACAC GATACTTTAC ACTGATTTTA TAATGTCAAA CCTAATCGAT
ATGCTAAAAG AGCAAGAAGC AAATGCCGAT GTAGCGCTAT TTTATCTCTC TGATCACGGC
GAGAGCCTCG GAGAAAACGG CATTTATCTG CACGGTCTGC CATACGCTAT AGCCCCTGAC
GAGCAAAAGC ATATCCCTGC CATCGCTTGG TTTGGTGAAA GCCTAAAGGA TAAAAAGCAA
AATTTACAAA ACGTAAAAGG CGAGCGCTTC TCTCAGGATA ACGTCTTTCA CTCGCTACTT
GGCTTTTTTG ACATAAACAC AAGCGTCTAC AAGCAAAATT TAGACCTATT TAATATAAAA
TAA
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| Protein sequence | MQKVLHIKTL TLILVFSIFM SLLNYQFFLF CFKDISFDGN KTIFFTLPII YFILTNFIYS
VLLIPYIWKF IAVLTVLISS LSAYFMGAYG VILDSEMIRN VFETNPAEAA SYLNFNLVLW
LVFTCILPII YIIKVKVRYV NFKQELIKRV SFTLGCIVIL GVFSVFLTKT YMPFFREHNH
ARFYNLPFYP IYSTNKFIKQ RYFYKKEEFK IIAADATRVK GDRQKILIFI VGEAARSANY
SLNGYKLHDT NKFTQAKDVV SLPDFYSCGT ATAQSVPCMF SNLGRENFSV DKANNQENAI
DILAKTGVDV YWAENDNGCK GVCDRMKNVI QRDVGMDTVL LEDAKNWLEI AKKDGNDTAI
FIHIIGSHGP TYFERYPKEF AQFSPSCETS ELKNCSSEEI VNVYDNTILY TDFIMSNLID
MLKEQEANAD VALFYLSDHG ESLGENGIYL HGLPYAIAPD EQKHIPAIAW FGESLKDKKQ
NLQNVKGERF SQDNVFHSLL GFFDINTSVY KQNLDLFNIK
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