| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0081 |
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| Symbol | |
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| ID | 5406249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | - |
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| Start bp | 1195182 |
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| End bp | 1197251 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640872640 |
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| Product | transporter |
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| Protein accession | YP_001408457 |
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| Protein GI | 154173965 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.1356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATA TCAACGAAAA CGAAGAGCAG TTTGTAGAGG TCAAAACTAG GGAGATAAAT
AACAATTTTT ATAATTATTT CATTGCGATA TTATGTTTTT CATGGTCGGT TTTTCAGCTT
TATATCGCGT ATTTTCCTAT GAATACGAAC ATCTCTCGCT CTATCCACCT TGCATTTGCG
ATCGCACTCG TATTTTTGCT TTACCCTGTG AAATTTCATA AAAAAGCGCA TTTTTCCATG
CCGTTTTACG ATATCGCTCT TTGCGTTTTA GGAACTGCCG TAGTGCTCTA TCCGGCGATC
GATTTTTATG GACTTGCTTC AAGGCCGGGT GATTACTTAC AAAGAGACGT TATAGTGGCT
TTCGTAGCCA TAATCATCCT TATAGAAGCC GGCAGACGCG TCATCGGACC TGCGCTTGGC
ATCATCTGTA TTTTGTTTTT GATATATGAT TATTTTGGTC CTTATATGCC AGACATCATC
GCTCATCAAG GTGCTAGCCT AGAAAAGCTT GCCGGGCATA TGTTTCTTAC GACGGAGGGC
ATATTTGGCG TTCCTATCGG CGTTAGTGTC AGCTTTATCT ATTTATTCGT TTTATTCGGT
TCGCTACTTG AAAGAGCCGG AGCGGGGCAA TATTTCATAA ATTTAGCCTT CTCTTTGCTC
GGTAAATTTA GAGGCGGTCC GGCGAAAGCA TCAGTCATCG CTAGCGGACT GACGGGCATG
GTCTCTGGAA GCTCGACTGC AAATGTCGTG ACTGTCGGTA CATTTACGAT ACCGCTAATG
AAAAAAGCGG GACTTTCTCG TGTGAAAGCC GGAGCTATTG AGGTCGCAGC GGGCGTAAAC
GGACAGCTCA TGCCGCCTAT CATGGGCGCA GCCGCATTCA TCATAGCAGA ATTTTTGGGC
ATGAGCTACA CTAATGTCAT GATGTCGGCC GTCATCCCGG CGTTTGCATG TTATATTTCG
CTATTTTTCA TCGTGCATTT AGAAAGCTGT AAAATAGGCC TAAAAGGTAT CGATCAAAGC
GAATATCACT CGAGATTTAA AATTTTCCTC AGCGGACTTC ATTATCTCAC GCCGATCCTC
ATCTTGCTTT ATACGCTTTT GATCCTAAAA GAGTCCGCTA TTTCGGCAGC ATTCAATGCG
ATCGGATTTT TATTTTTGAT CATGATATTT CAAGAGCCGG TCAAAAAGCT AGCCGCAGGC
GAAAAAGTCG GACTAAACGA TGCTTTGCTC GGTTTTAGCG ATATATTTTG GGCGATGGTC
ACTGCTGCAA AAAGCATGAC TACGATCGCG ATAGCTACCG GTTTGGCCGG TATTATCGTA
GGCTCTATAT CATTGACCGG GCTTGGTCAA GTGCTATCAG ATATCGTGGA GCAGCTTGCC
GGGAACAATA TCATTCTTAT CTTGATCCTG ACTGCCGTGA TGTCGCTCAT ACTCGGTATG
GGCTTGCCGA CTACGGCAAA CTATATCGTG GTATCAAGCC TCGTTGCACC GGTCATTTTA
TTTTTGGCGC ATAAAAACGG CTTTTTGATA CCTGCCATCG CGGTGCATCT TTTTGTATTT
TATTTTGGAA TTTTAGCTGA CGATACGCCA CCTGTCGGTA TCGCCGCCTA TGCAGCCGCA
GGTATTGCAA AGGCAAACCC TGTCACCGTA GGCATGCAAG GCTTTTTTTA CGACCTAAGG
ACCGCGATAT TGCCGTTTGC CTTTTTCTTC AACAATAAAC TGATGCTGAT AGAAAGCATC
GATGCAAAAG ATCCTCTGGA TGCAAAAGGT ATCGTTTGGA TGAGTAATCC GTTTGAGATC
GTGCTCGTAT TTGGCATGGC TATCGTCGGG ATGTTTGCAT TTTCGAGCGT GCTTCAGGGC
TACTTCGTGA CGAAGGTTCG CATTTGGGAG CGCATTTTAC TTTTACTTGT CGTTCCTTTG
ACGCTAGTGC CAAATATCTG CGCCAGATAC TCCGTCATAC CAAACGAATA TGTAGGCTAT
ATGATAGGCA CAGCGATATA CTTTTTTGTA TTCATGACTC AATGGGGCAA AAATCAAAAG
GATAAAGCCG CTTCAAAGGC AGCCGCGTAG
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| Protein sequence | MNNINENEEQ FVEVKTREIN NNFYNYFIAI LCFSWSVFQL YIAYFPMNTN ISRSIHLAFA
IALVFLLYPV KFHKKAHFSM PFYDIALCVL GTAVVLYPAI DFYGLASRPG DYLQRDVIVA
FVAIIILIEA GRRVIGPALG IICILFLIYD YFGPYMPDII AHQGASLEKL AGHMFLTTEG
IFGVPIGVSV SFIYLFVLFG SLLERAGAGQ YFINLAFSLL GKFRGGPAKA SVIASGLTGM
VSGSSTANVV TVGTFTIPLM KKAGLSRVKA GAIEVAAGVN GQLMPPIMGA AAFIIAEFLG
MSYTNVMMSA VIPAFACYIS LFFIVHLESC KIGLKGIDQS EYHSRFKIFL SGLHYLTPIL
ILLYTLLILK ESAISAAFNA IGFLFLIMIF QEPVKKLAAG EKVGLNDALL GFSDIFWAMV
TAAKSMTTIA IATGLAGIIV GSISLTGLGQ VLSDIVEQLA GNNIILILIL TAVMSLILGM
GLPTTANYIV VSSLVAPVIL FLAHKNGFLI PAIAVHLFVF YFGILADDTP PVGIAAYAAA
GIAKANPVTV GMQGFFYDLR TAILPFAFFF NNKLMLIESI DAKDPLDAKG IVWMSNPFEI
VLVFGMAIVG MFAFSSVLQG YFVTKVRIWE RILLLLVVPL TLVPNICARY SVIPNEYVGY
MIGTAIYFFV FMTQWGKNQK DKAASKAAA
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