| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_0078 |
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| Symbol | |
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| ID | 5407831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter curvus 525.92 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009715 |
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| Strand | + |
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| Start bp | 1192537 |
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| End bp | 1193856 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640872637 |
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| Product | mate efflux family protein |
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| Protein accession | YP_001408454 |
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| Protein GI | 154174912 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.129262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAT CTCTTAAAAA ACTCACCGTG CCGATATTCA TCGATCTATT TTTGCACTTC
ATCACGCTCA TCATGAACAC TTACATGGTT GCAAAAGTGA GCATACATCT AGTCGGAGCG
ATGGGTGCTG GCAACGAAGT GATGGATCTT TTTATCACGA TATTTAACTT CCTTAGCGTG
GGCTGCTCCG TAGTGGTAGC GCAGGCTCTG GGTGCGCGAA ACAACAACCT AGCAAAGTGC
GTCATACACG CGAGCCTGAC ATTTAACACT ATCATCGGCA TCATCTCGGC CAGCGTCATT
TACTTTTTCG GATATGAAAT TTTGGAGCTT TTGCAAGTGC CGCAGCAGCT TAGAGGAGAC
AGCTTTAGCT ATTTGCATAT ACTTGGCATC GCGCTCGCAT TTGACGGCAT CGGCATGGTA
CTAGCCGCCG TCCTTCGCGT GTATAACCTA GCGACCGCCG TCATGCTCGT ATCGCTTTTA
ATGAACGTCA TCACGCTTTT TGGCAACGCA GTCGCACTCT TTGGCTGGTT TGGACTGGCT
AACTACGGGC TTTACGGCGT CGGGCTCTCC ACGCTCATCG GACGCCTCAT CGGAGTTTTT
GTCCTACTTT GGATACTCGT GAGCGTGGCG AAAGTTAGAA TTTATATCAA GATGCTGTTT
AGCTTGCCGT TTAACATCTT AAAGAAAATT TTATCGGTCG GGCTACCTAG TGCCGGTGAA
AATTTACTCT GGACGACGCA ATACCTGGTC GCTTTTAGCT TCATCGCGAG CATGGGCGAG
GCGAGCCTGA ACGTGCAAAC CATTTACTTT CAGATCACGC TTCTCATCTT ACTTTGCGGA
GCGAGCATAA GTGTCGCCAA CGAAGTCATC GTCGGACACC TCGTGGGCGC GATGAAATTT
GACGAGGCAT ACACGCGCAC GTTTCATGCG CTAAGGCTCG GCCTCATCGC CACGCTCGTG
GTCGTGCTGG TAGCATATTT TGCGAAATTT GAGATCATGC AGCGGCTAAA TTTGACCCCC
GAGCTTCAAA AGGTCATGTT ACCGCTTTTC ACGCTATCCA TCGTGCTAGA AACCGGCCGC
ACCTTCAATG TCGTCATCGT AAATGCCCTG CGCGCGAGCG GAGACGCGAA ATTCCCGCTG
ATGACGGGCT TTATCTTCAT GTGGGGGCTT AGCTTGCCGC TTGGATATTT TTTAGGCATA
CACCTAGGAT ACGGCATTGT GGGCGTTTGG GTCGGATTTG TCGCGGACGA GTGGGTGCGA
GGGCTGGTTA ATACCTGGCG GTGGCGAAGC CGAAAATGGC AGTCAAAAAG GCTCGTGTGA
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| Protein sequence | MNLSLKKLTV PIFIDLFLHF ITLIMNTYMV AKVSIHLVGA MGAGNEVMDL FITIFNFLSV
GCSVVVAQAL GARNNNLAKC VIHASLTFNT IIGIISASVI YFFGYEILEL LQVPQQLRGD
SFSYLHILGI ALAFDGIGMV LAAVLRVYNL ATAVMLVSLL MNVITLFGNA VALFGWFGLA
NYGLYGVGLS TLIGRLIGVF VLLWILVSVA KVRIYIKMLF SLPFNILKKI LSVGLPSAGE
NLLWTTQYLV AFSFIASMGE ASLNVQTIYF QITLLILLCG ASISVANEVI VGHLVGAMKF
DEAYTRTFHA LRLGLIATLV VVLVAYFAKF EIMQRLNLTP ELQKVMLPLF TLSIVLETGR
TFNVVIVNAL RASGDAKFPL MTGFIFMWGL SLPLGYFLGI HLGYGIVGVW VGFVADEWVR
GLVNTWRWRS RKWQSKRLV
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