Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCV52592_0025 |
Symbol | |
ID | 5407565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter curvus 525.92 |
Kingdom | Bacteria |
Replicon accession | NC_009715 |
Strand | - |
Start bp | 1843652 |
End bp | 1844752 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640873297 |
Product | triple helix repeat-containing collagen |
Protein accession | YP_001409078 |
Protein GI | 154174268 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.123658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATC TTTATGAGCT GAAAATGGGA GCTGAGAAGC TTGAAGCCTT AAAAGTATTG CTTGAAAATT TAAAAGAGCT CGAAGCAGCG ATAACGAGGC TAAATTTAGA GGAATTAAAG GGTATAAAAT CAGCTTTTGA CGACAAATAC AATACCTTTG ATAAATTTGT AAATAGTCTT GACGCCTTAA GAAGCGAGCT TTTGGATAAA GTGCAAGCCA AAGGCGAGCG AGGCGAAAAA GGCGATCGAG GAGAACGCGG ACCAGCGGGA CCTATCGGAC CAAAAGGAGA CAAGGGAGAG AGCGGGCAAA AAGGCGACAG AGGCGAGAGC TTTACAGTGA GTGCCATAGG TGCTTCAAGT GAGCTTACTA AATATGACGC AAAAGAAAAA GGTTTTAGCT TTTTAGATAC GGATAAGGGG CTGCTTTATT TCAAAAATTC AGATGCCAGC GGCGACTGGT CGGCTCCTAT CGCATTCGGG AAAGGCGAGA AAGGAGATAA AGGCGATACA GGTCCGCAGG GGTTGCAAGG AGAGCGCGGA CCTGCCGGGC AGCAAGGAGC TCAAGGCCCA AGAGGTGAAC GTGGAGAAAC CGGGCCTGCC GGTGCTCAAG GACTTCAAGG AGTGCCTGGA GTAAAAGGAG ATACCGGAGC AAAGGGCGAC GCAGGAGAAA GAGGCCCGCA AGGTATCCAA GGACCTGCTG GACCGAAAGG CGATAAAGGC GATCCAAACC CTAATGCCGA GAATAGTGCA AAGCTAGGTG GTAAGTCTGC TGCTGAATAT GCTCTAAAAA ATGAAATAAA AGATAGCATG CCAGTGAGCG CGTATGTTTG TTTTTTAGGT GCAAATGGGG AAATCAAAAA AAGTAAAAAT ATATCTAGTA TTGTAAGAAA GAGGGCGGGA GACTATCAAA TTAATTTTAT AGAGCCACTT GACGAAAATT ATGTGTGCCT TATATCGGGA ACGGATAAGG CTACACTTAC TGATTTTCCA GCAAGGAATC TGCTAACCTA TAATAAAAAG ACTCAAAGTA TAGATGTGAT CATAAAAGCT TTTGGAACAG ATACTTCGGA TTATTATGCA ATTAATTTAG TGTGTTATTA G
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Protein sequence | MTNLYELKMG AEKLEALKVL LENLKELEAA ITRLNLEELK GIKSAFDDKY NTFDKFVNSL DALRSELLDK VQAKGERGEK GDRGERGPAG PIGPKGDKGE SGQKGDRGES FTVSAIGASS ELTKYDAKEK GFSFLDTDKG LLYFKNSDAS GDWSAPIAFG KGEKGDKGDT GPQGLQGERG PAGQQGAQGP RGERGETGPA GAQGLQGVPG VKGDTGAKGD AGERGPQGIQ GPAGPKGDKG DPNPNAENSA KLGGKSAAEY ALKNEIKDSM PVSAYVCFLG ANGEIKKSKN ISSIVRKRAG DYQINFIEPL DENYVCLISG TDKATLTDFP ARNLLTYNKK TQSIDVIIKA FGTDTSDYYA INLVCY
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