Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1793 |
Symbol | |
ID | 5408400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 1709901 |
End bp | 1710671 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640871459 |
Product | hydrolase in agr operon (ORF 5) |
Protein accession | YP_001407303 |
Protein GI | 154148802 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0383945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTT CAATGATACA ATTTTCGTCC GTTAAATTTC AGATTGAAAA AAACTATGAA AAAGTTTTAA ATTTTATGCA GGATGCAATA TCAAAAAAAA CGGATATTAT TGTTTTACCG GAACTTTTTG ATACGGGATT TTTTCCAAGT AAAAATTTGG AAAAATTCGC TGATAAAAAT GCTTTTAGAG CGCGTGAAAT TTTTAGCAAT TTTGCGCGTG AAAATTGTGT AAATATTGTA GCTGGAAGCA TTTGTGAAAT GCGAAACGAT AAACTTTTCA ATGCAAGTTA TATTTTTGAT AAAAACGGAA AAATAATAGC AAATTATGAC AAAATTCATC TTTTTTCGAC AGGTAATGAA AAAGAGAGTG AAATTTTTAC ACCAGGCGAA AAAATTATAA GTTTCAGACT TAATGAAATT CCTTGCGGGA TTATGATATG TTACGATTTG CGTTTTGCTG AAATCGCTAA AATTCTTGCT TTGCGCGGAA TTTCAGTGCT TTTTGTAGTG GCTCAATGGC CTTTAAAAAG AATAAAACAT TTTGAAATTT TGGCGAAAGC AAGAGCAATT GAAAATGAAT TTTTTGTTTG CGCATTAAAC GGATTTGGAA ATTCTATTTT AATCAATCCC AACGGCGATG AAATTTTAAA ATTTGATTTA AATGAAGGTG TAAAAACAGT CGAAATAAAT TTAGATGAAA TTATGCAGGC AAGAGATTTT TTACATGTTT TTGAAGATAG AAAACCTGAA ATTTATAAGG AGATATTATG A
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Protein sequence | MKISMIQFSS VKFQIEKNYE KVLNFMQDAI SKKTDIIVLP ELFDTGFFPS KNLEKFADKN AFRAREIFSN FARENCVNIV AGSICEMRND KLFNASYIFD KNGKIIANYD KIHLFSTGNE KESEIFTPGE KIISFRLNEI PCGIMICYDL RFAEIAKILA LRGISVLFVV AQWPLKRIKH FEILAKARAI ENEFFVCALN GFGNSILINP NGDEILKFDL NEGVKTVEIN LDEIMQARDF LHVFEDRKPE IYKEIL
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