Gene CHAB381_1762 details

Gene Information

• Locus tag: CHAB381_1762
• Symbol: thyX
• ID: 5409438
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 1684106
• End bp: 1684726
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640871429
• Product: FAD-dependent thymidylate synthase
• Protein accession: YP_001407273
• Protein GI: 154148313
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1351] Predicted alternative thymidylate synthase
• TIGRFAM ID: [TIGR02170] thymidylate synthase, flavin-dependent

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGATAA AACTTCTAAA TTTCACGCCG CTTTGGGTTT GTGCACACGC TACAAGAACT 
TGCTGGCAAA GTTTCGCAAA AGGCGATAAT GGCGGTGAAA AAGATTGTGA GCTCATAGAT 
AGAGTCGGCA ATAAATTCAA ACACGCTTCC ACATTGGAAC ATTTAAGTTA TAATTTTTAT 
ATAAAAGAAA TTTCGCGCGC ACTTTTGCAA GAGTTGGCAC GCCACAGAAT GGCGAGTCTT 
AGCGTAAAAT CTACAAGGTA TACATTAAAA GAGTTAAAAA ACGAGCAGGA ATTTATCGCG 
GATGACTTAA AGCGAGCCGA AAAATATCTG GTTTTTACGG GAAATTCCGA CGTTGATAAA 
GCTTCTATTA CCGCACTTGA AAATTTACGC AAAATTTTAA ATACAAACGT AAGCCTTGAT 
ATCGCAAAAT ATTGTTTGCC TGAAAGTTAC AAAACGGAAC TTACCTGGAC GATAAATGCG 
CGATCCTTGC AAAATTTTCT TTCACTTCGC ACAAGCAAAT CCGCTCTTTG GGAAATAAGA 
AAACTTGCTT ATGCCATTTT CGAAGCTTTG CCGGAAGAGC ATAAGTTTAT ATTTGAAGAT 
AAAATTTATA AAGAAAGCTA A 

 

Protein sequence

MQIKLLNFTP LWVCAHATRT CWQSFAKGDN GGEKDCELID RVGNKFKHAS TLEHLSYNFY 
IKEISRALLQ ELARHRMASL SVKSTRYTLK ELKNEQEFIA DDLKRAEKYL VFTGNSDVDK 
ASITALENLR KILNTNVSLD IAKYCLPESY KTELTWTINA RSLQNFLSLR TSKSALWEIR 
KLAYAIFEAL PEEHKFIFED KIYKES